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Genetics

D-Index
86
Citations
44287
World Ranking
1234
National Ranking
16

Overview

Graziano Pesole is affiliated with the University of Bari Aldo Moro in Italy. Their research primarily spans the fields of Biochemistry, Genetics and Molecular Biology, and Medicine, with a strong focus on Molecular Biology, Ecology, Infectious Diseases, Genetics, and Oncology. The main topics in their work include RNA regulation and disease, RNA modifications and cancer, genomics and phylogenetic studies, gut microbiota and health, RNA research and splicing, microbial community ecology and physiology, and RNA and protein synthesis mechanisms.

Pesole's recent publications cover a range of subjects related to these topics. Notable papers include:

  • "Endogenous murine microbiota member Faecalibaculum rodentium and its human homologue protect from intestinal tumour growth" (2020), published in Nature Microbiology
  • "Next generation sequencing of SARS-CoV-2 genomes: challenges, applications and opportunities" (2020), published in Briefings in Bioinformatics
  • "REDIportal: millions of novel A-to-I RNA editing events from thousands of RNAseq experiments" (2020), published in Nucleic Acids Research
  • "Investigating RNA editing in deep transcriptome datasets with REDItools and REDIportal" (2020), published in Nature Protocols
  • "Studying severe long COVID to understand post-infectious disorders beyond COVID-19" (2022), published in Nature Medicine

Throughout their career, Pesole has published extensively, including contributions to book publications such as RNA Editing (2020), published by Springer Science+Business Media.

They have co-authored work with several frequent collaborators, including Ernesto Picardi, Matteo Chiara, Bruno Fosso, Caterina Manzari, and Marinella Marzano.

Pesole has contributed to a variety of publication venues, such as:

  • Zenodo (CERN European Organization for Nuclear Research)
  • bioRxiv (Cold Spring Harbor Laboratory)
  • Faculty of 1000 Research Ltd
  • Frontiers in Microbiology
  • Methods in molecular biology

Best Publications

  • The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla.

    Olivier Jaillon;Jean Marc Aury;Benjamin Noel;Alberto Policriti

  • The Transcriptional Landscape of the Mammalian Genome

    P. Carninci;T. Kasukawa;S. Katayama;J. Gough

  • Evolution of genes and genomes on the Drosophila phylogeny.

    Andrew G. Clark;Michael B. Eisen;Michael B. Eisen;Douglas R. Smith;Casey M. Bergman

  • Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

    Y. Okazaki;M. Furuno;T. Kasukawa;J. Adachi

  • Assessing computational tools for the discovery of transcription factor binding sites.

    Martin Tompa;Nan Li;Timothy L. Bailey;George M. Church

  • Genome sequence of the metazoan plant-parasitic nematode Meloidogyne incognita

    Pierre Abad;Pierre Abad;Jérôme Gouzy;Jean-Marc Aury;Jean-Marc Aury;Philippe Castagnone-Sereno;Philippe Castagnone-Sereno

  • Untranslated regions of mRNAs

    Flavio Mignone;Carmela Gissi;Sabino Liuni;Graziano Pesole

  • Functional annotation of a full-length mouse cDNA collection

    J. Kawai;A. Shinagawa;K. Shibata;M. Yoshino

  • Mammalian mitochondrial D-loop region structural analysis: identification of new conserved sequences and their functional and evolutionary implications

    Elisabetta Sbisà;Filomena Tanzariello;Aurelio Reyes;Graziano Pesole

  • Evolution of the mitochondrial genome of Metazoa as exemplified by comparison of congeneric species

    Carmela Gissi;F Iannelli;Graziano Pesole

  • Weeder Web: discovery of transcription factor binding sites in a set of sequences from co-regulated genes

    Giulio Pavesi;Paolo Mereghetti;Giancarlo Mauri;Graziano Pesole

  • Evolutionary genomics in Metazoa: the mitochondrial DNA as a model system.

    Cecilia Saccone;Carla De Giorgi;Carmela Gissi;Graziano Pesole

  • Structural and functional features of eukaryotic mRNA untranslated regions

    Graziano Pesole;Flavio Mignone;Carmela Gissi;Giorgio Grillo

  • Nucleotide substitution rate of mammalian mitochondrial genomes.

    Graziano Pesole;Carmela Gissi;Anna De Chirico;Cecilia Saccone

  • An algorithm for finding signals of unknown length in DNA sequences

    Giulio Pavesi;Giancarlo Mauri;Graziano Pesole

  • The main regulatory region of mammalian mitochondrial DNA: structure-function model and evolutionary pattern.

    Cecilia Saccone;Graziano Pesole;Elisabetta Sbisá

  • Pscan: finding over-represented transcription factor binding site motifs in sequences from co-regulated or co-expressed genes

    Federico Zambelli;Graziano Pesole;Giulio Pavesi

  • The guinea-pig is not a rodent

    Anna Maria D'Erchia;Anna Maria D'Erchia;Carmela Gissi;Carmela Gissi;Graziano Pesole;Cecilia Saccone;Cecilia Saccone

  • Asymmetrical directional mutation pressure in the mitochondrial genome of mammals.

    Aurelio Reyes;Carmela Gissi;Graziano Pesole;Cecilia Saccone

  • No metagenomic evidence of tumorigenic viruses in cancers from a selected cohort of immunosuppressed subjects.

    Nunzia Passaro;Andrea Casagrande;Matteo Chiara;Bruno Fosso

Frequent Co-Authors

Cecilia Saccone
Cecilia Saccone University of Bari Aldo Moro
David S. Horner
David S. Horner University of Milan
Giancarlo Mauri
Giancarlo Mauri University of Milano-Bicocca
Rita Casadio
Rita Casadio University of Bologna
Giorgio Valle
Giorgio Valle University of Padua
Massimo Carella
Massimo Carella Casa Sollievo della Sofferenza
Francesca Gualandi
Francesca Gualandi University of Ferrara
Mario Pezzotti
Mario Pezzotti University of Verona
Massimo Delledonne
Massimo Delledonne University of Verona
Michele Morgante
Michele Morgante University of Udine

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