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Microbiology

D-Index
90
Citations
30850
World Ranking
680
National Ranking
35

Overview

Erick Denamur is a researcher affiliated with Université Paris Cité in France, specializing in Biochemistry, Genetics, and Molecular Biology with a significant focus on Medicine. Their work spans several subfields, including Molecular Medicine, Endocrinology, Molecular Biology, Infectious Diseases, and Genetics.

Their research topics cover a range of areas within microbiology and genetics, particularly concentrating on:

  • Antibiotic Resistance in Bacteria
  • Escherichia coli research studies
  • Bacteriophages and microbial interactions
  • Gut microbiota and health
  • Genomics and Phylogenetic Studies
  • Clostridium difficile and Clostridium perfringens research
  • Evolution and Genetic Dynamics

Erick Denamur has contributed to publications across various journals, including frequent publications in:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • PLoS Genetics
  • Nature Microbiology
  • Journal of Antimicrobial Chemotherapy
  • Antimicrobial Agents and Chemotherapy

Some of their recent papers include:

  • The population genetics of pathogenic Escherichia coli, 2020, Nature Reviews Microbiology
  • Phylogenetic background and habitat drive the genetic diversification of Escherichia coli, 2020, PLoS Genetics
  • The impact of genetic diversity on gene essentiality within the Escherichia coli species, 2021, Nature Microbiology
  • Major role of iron uptake systems in the intrinsic extra-intestinal virulence of the genus Escherichia revealed by a genome-wide association study, 2020, PLoS Genetics
  • Prediction of strain level phage-host interactions across the Escherichia genus using only genomic information, 2024, Nature Microbiology

Frequent co-authors collaborating with Erick Denamur include:

  • Olivier Clermont
  • Bénédicte Condamine
  • Guilhem Royer
  • Sara Dion
  • Victoire de Lastours

Best Publications

  • The Clermont Escherichia coli phylo‐typing method revisited: improvement of specificity and detection of new phylo‐groups

    Olivier Clermont;Olivier Clermont;Julia K. Christenson;Erick Denamur;Erick Denamur;David M. Gordon

  • The population genetics of commensal Escherichia coli.

    Olivier Tenaillon;David Skurnik;Bertrand Picard;Erick Denamur

  • Organised Genome Dynamics in the Escherichia coli Species Results in Highly Diverse Adaptive Paths

    Marie Touchon;Marie Touchon;Claire Hoede;Olivier Tenaillon;Valérie Barbe

  • The link between phylogeny and virulence in Escherichia coli extraintestinal infection

    Bertrand Picard;José Sevali Garcia;Stéphanie Gouriou;Patrick Duriez

  • Stress-Induced Mutagenesis in Bacteria

    Ivana Bjedov;Ivana Bjedov;Olivier Tenaillon;Olivier Tenaillon;Bénédicte Gérard;Bénédicte Gérard;Valeria Souza;Valeria Souza

  • ClermonTyping: an easy-to-use and accurate in silico method for Escherichia genus strain phylotyping

    Johann Beghain;Antoine Bridier-Nahmias;Hervé Le Nagard;Erick Denamur

  • The population genetics of pathogenic Escherichia coli.

    Erick Denamur;Erick Denamur;Olivier Clermont;Olivier Clermont;Stéphane Bonacorsi;David Gordon

  • Evolution of mutation rates in bacteria

    Erick Denamur;Ivan Matic

  • Highly Variable Mutation Rates in Commensal and Pathogenic Escherichia coli

    Ivan Matic;Miroslav Radman;François Taddei;Bertrand Picard

  • The sensitivity of HIV-1 DNA polymerase chain reaction in the neonatal period and the relative contributions of intra-uterine and intra-partum transmission

    Mari Rose A. Aplasca;David Siegel;Jeffrey S. Mandel;Rosemarie T. Santana-Arciaga

  • A Specific Genetic Background Is Required for Acquisition and Expression of Virulence Factors in Escherichia coli

    Patricia Escobar-Páramo;Olivier Clermont;Anne-Béatrice Blanc-Potard;Hung Bui

  • Rapid detection of the O25b-ST131 clone of Escherichia coli encompassing the CTX-M-15-producing strains

    Olivier Clermont;Hiran Dhanji;Mathew Upton;Tarek Gibreel

  • Phylogenetic and genomic diversity of human bacteremic Escherichia coli strains

    Françoise Jaureguy;Françoise Jaureguy;Luce Landraud;Virginie Passet;Laure Diancourt

  • Commensal Escherichia coli isolates are phylogenetically distributed among geographically distinct human populations.

    Patrick Duriez;Olivier Clermont;Stéphane Bonacorsi;Edouard Bingen

  • Assigning Escherichia coli strains to phylogenetic groups: multi‐locus sequence typing versus the PCR triplex method

    David M. Gordon;Olivier Clermont;Heather Tolley;Erick Denamur

  • Phylogenetic Analysis of Escherichia coli Strains Causing Neonatal Meningitis Suggests Horizontal Gene Transfer from a Predominant Pool of Highly Virulent B2 Group Strains

    Edouard Bingen;Bertrand Picard;Naïma Brahimi;Stéphanie Mathy

  • The CTX-M-15-producing Escherichia coli diffusing clone belongs to a highly virulent B2 phylogenetic subgroup

    Olivier Clermont;Marie Lavollay;Sophie Vimont;Catherine Deschamps

  • Large-scale population structure of human commensal Escherichia coli isolates.

    Patricia Escobar-Páramo;Karine Grenet;Arnaud Le Menac'h;Luc Rode

  • Extraintestinal Virulence Is a Coincidental By-Product of Commensalism in B2 Phylogenetic Group Escherichia coli Strains

    Tony Le Gall;Olivier Clermont;Stéphanie Gouriou;Bertrand Picard

  • Identification of constitutional WT1 mutations, in patients with isolated diffuse mesangial sclerosis, and analysis of genotype/phenotype correlations by use of a computerized mutation database

    C. Jeanpierre;E. Denamur;I. Henry;M.-O. Cabanis

  • Identification of forces shaping the commensal Escherichia coli genetic structure by comparing animal and human isolates

    Patricia Escobar-Páramo;Arnaud Le Menac’h;Tony Le Gall;Christine Amorin

Frequent Co-Authors

Olivier Clermont
Olivier Clermont Université Paris Cité
Bertrand Picard
Bertrand Picard Université Paris Cité
Jacques Elion
Jacques Elion Université Paris Cité
Olivier Tenaillon
Olivier Tenaillon Université Paris Cité
Edouard Bingen
Edouard Bingen Université Paris Cité
Antoine Andremont
Antoine Andremont Université Paris Cité
Guillaume Arlet
Guillaume Arlet Sorbonne University
James R. Johnson
James R. Johnson University of Minnesota
Eduardo P. C. Rocha
Eduardo P. C. Rocha Institut Pasteur
Claudine Médigue
Claudine Médigue University of Paris-Saclay

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