World's Best Scientists 2026 revealed!
Carsten O. Daub

Carsten O. Daub

D-Index & Metrics

Genetics

D-Index
52
Citations
19957
World Ranking
3759
National Ranking
47

Overview

Carsten O. Daub is affiliated with the Karolinska Institute in Sweden and has an active research portfolio spanning biochemistry, genetics, molecular biology, and medicine. Their work focuses on molecular biology, with notable subfields including molecular biology, genetics, cardiology and cardiovascular medicine, cancer research, and physiology.

The scientist's research topics prominently cover genomics and chromatin dynamics, RNA research and splicing, cancer-related molecular mechanisms, RNA and protein synthesis mechanisms, molecular biology techniques and applications, congenital heart defects, and developmental health.

Daub's recent publications include:

  • Sequence determinants of human gene regulatory elements, 2022, Nature Genetics
  • Identification and transfer of spatial transcriptomics signatures for cancer diagnosis, 2020, Breast Cancer Research
  • Multiomic atlas with functional stratification and developmental dynamics of zebrafish cis-regulatory elements, 2022, Nature Genetics
  • Dog colour patterns explained by modular promoters of ancient canid origin, 2021, Nature Ecology & Evolution
  • Sequence determinants of human gene regulatory elements, 2021, bioRxiv (Cold Spring Harbor Laboratory)

Frequent coauthors collaborating with Daub include:

  • Abdul Kadir Mukarram
  • Juha Kere
  • Matthias Hörtenhuber
  • Irene Stevens
  • Shintaro Katayama

Their work has been published repeatedly in notable venues such as:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Nature Communications
  • Nature Genetics
  • Scientific Reports
  • Zenodo (CERN European Organization for Nuclear Research)

Best Publications

  • An atlas of active enhancers across human cell types and tissues

    Robin Andersson;Claudia Gebhard;Irene Miguel-Escalada;Ilka Hoof

  • A promoter-level mammalian expression atlas

    Alistair R.R. Forrest;Hideya Kawaji;Michael Rehli;J. Kenneth Baillie

  • The mutual information: detecting and evaluating dependencies between variables.

    Ralph E. Steuer;Jürgen Kurths;Carsten O. Daub;Janko Weise

  • An atlas of human long non-coding RNAs with accurate 5′ ends

    Chung Chau Hon;Jordan A. Ramilowski;Jayson Harshbarger;Nicolas Bertin;Nicolas Bertin

  • The regulated retrotransposon transcriptome of mammalian cells.

    Geoffrey J Faulkner;Yasumasa Kimura;Carsten O Daub;Shivangi Wani

  • An Atlas of Combinatorial Transcriptional Regulation in Mouse and Man

    Timothy Ravasi;Harukazu Suzuki;Carlo Vittorio Cannistraci;Shintaro Katayama

  • Gateways to the FANTOM5 promoter level mammalian expression atlas

    Marina Lizio;Jayson Harshbarger;Hisashi Shimoji;Jessica Severin

  • Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells

    Erik Arner;Carsten O. Daub;Kristoffer Vitting-Seerup;Robin Andersson

  • An integrated expression atlas of miRNAs and their promoters in human and mouse.

    Derek De Rie;Imad Abugessaisa;Tanvir Alam;Erik Arner

  • The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line

    Harukazu Suzuki;Alistair R.R. Forrest;Erik Van Nimwegen;Carsten O. Daub

  • Tiny RNAs associated with transcription start sites in animals.

    Ryan J Taft;Evgeny A Glazov;Nicole Cloonan;Cas Simons

  • A comprehensive survey of 3′ animal miRNA modification events and a possible role for 3′ adenylation in modulating miRNA targeting effectiveness

    A. Maxwell Burroughs;Yoshinari Ando;Michiel J.L. de Hoon;Yasuhiro Tomaru

  • Estimating mutual information using B-spline functions – an improved similarity measure for analysing gene expression data

    Carsten O Daub;Carsten O Daub;Ralf Steuer;Joachim Selbig;Sebastian Kloska

  • Conservation and divergence in Toll-like receptor 4-regulated gene expression in primary human versus mouse macrophages

    Kate Schroder;Katharine M Irvine;Martin S Taylor;Nilesh J Bokil

  • Hidden layers of human small RNAs.

    Hideya Kawaji;Mari Nakamura;Yukari Takahashi;Albin Sandelin

  • Deep-sequencing of human Argonaute-associated small RNAs provides insight into miRNA sorting and reveals Argonaute association with RNA fragments of diverse origin

    Alexander Maxwell Burroughs;Yoshinari Ando;Michiel Jan Laurens de Hoon;Yasuhiro Tomaru

  • Adipose Tissue MicroRNAs as Regulators of CCL2 Production in Human Obesity

    Erik Arner;Niklas Mejhert;Agné Kulyté;Piotr J. Balwierz

  • A predictive computational framework for direct reprogramming between human cell types.

    Owen J L Rackham;Jaber Firas;Hai Fang;Matt E Oates

  • MiR-107 and MiR-185 can induce cell cycle arrest in human non small cell lung cancer cell lines

    Yukari Takahashi;Alistair Raymond Russell Forrest;Emi Maeno;Takehiro Hashimoto

  • TagDust—a program to eliminate artifacts from next generation sequencing data

    Timo Lassmann;Yoshihide Hayashizaki;Carsten O. Daub

Frequent Co-Authors

Alistair R. R. Forrest
Alistair R. R. Forrest Harry Perkins Institute of Medical Research
Timo Lassmann
Timo Lassmann Telethon Kids Institute
David A. Hume
David A. Hume University of Queensland
Juha Kere
Juha Kere Karolinska Institute

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