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D-Index & Metrics

Biology and Biochemistry

D-Index
70
Citations
28181
World Ranking
6859
National Ranking
3164

Overview

Andrew I. Su is affiliated with the Scripps Research Institute in the United States. Their research spans areas within Biochemistry, Genetics, and Molecular Biology, with a substantial focus on Medicine. The scientist's work covers several subfields, including Molecular Biology, Infectious Diseases, Genetics, Computational Theory and Mathematics, and Information Systems and Management.

The primary research topics explored by Andrew I. Su include Biomedical Text Mining and Ontologies, Bioinformatics and Genomic Networks, Computational Drug Discovery Methods, Scientific Computing and Data Management, Research Data Management Practices, Data-Driven Disease Surveillance, and SARS-CoV-2 and COVID-19 Research.

Andrew I. Su has coauthored with several frequent collaborators, including Chunlei Wu, Marco Alvarado Cano, Ginger Tsueng, Xinghua Zhou, and Laura D. Hughes. These collaborations reflect a broad network within the fields of computational biology and biomedical research.

Key publication venues for Andrew I. Su's work include bioRxiv (Cold Spring Harbor Laboratory), where 14 publications appear, Zenodo (CERN European Organization for Nuclear Research) with eight publications, UNC Libraries, Scientific Data, and the Journal of Emerging Investigators.

Selected recent papers demonstrate the scientist's engagement with current biomedical and computational challenges. Among these are:

  • Discovery of SARS-CoV-2 antiviral drugs through large-scale compound repurposing, 2020, Nature
  • Outbreak.info genomic reports: scalable and dynamic surveillance of SARS-CoV-2 variants and mutations, 2023, Nature Methods
  • Wikidata as a knowledge graph for the life sciences, 2020, eLife
  • A Large-scale Drug Repositioning Survey for SARS-CoV-2 Antivirals, 2020, bioRxiv (Cold Spring Harbor Laboratory)
  • Outbreak.info genomic reports: scalable and dynamic surveillance of SARS-CoV-2 variants and mutations, 2022, bioRxiv (Cold Spring Harbor Laboratory)

Best Publications

  • A gene atlas of the mouse and human protein-encoding transcriptomes

    Andrew I. Su;Tim Wiltshire;Serge Batalov;Hilmar Lapp

  • Coordinated transcription of key pathways in the mouse by the circadian clock.

    Satchidananda Panda;Marina P. Antoch;Brooke H. Miller;Andrew I. Su;Andrew I. Su

  • Large-scale analysis of the human and mouse transcriptomes

    Andrew I. Su;Michael P. Cooke;Keith A. Ching;Yaron Hakak

  • BioGPS: an extensible and customizable portal for querying and organizing gene annotation resources.

    Chunlei Wu;Camilo Orozco;Jason Boyer;Marc Leglise

  • Genomic analysis of the host response to hepatitis C virus infection.

    Andrew I. Su;John P. Pezacki;Lisa Wodicka;Amy D. Brideau

  • Analysis of gene expression identifies candidate markers and pharmacological targets in prostate cancer.

    John B. Welsh;Lisa M. Sapinoso;Andrew I. Su;Suzanne G. Kern

  • Molecular Classification of Human Carcinomas by Use of Gene Expression Signatures

    Andrew I. Su;John B. Welsh;Lisa M. Sapinoso;Suzanne G. Kern

  • Discovery of SARS-CoV-2 antiviral drugs through large-scale compound repurposing.

    Laura Riva;Shuofeng Yuan;Xin Yin;Laura Martin-Sancho

  • Stress-Independent Activation of XBP1s and/or ATF6 Reveals Three Functionally Diverse ER Proteostasis Environments

    Matthew D. Shoulders;Lisa M. Ryno;Joseph C. Genereux;James J. Moresco

  • CIViC is a community knowledgebase for expert crowdsourcing the clinical interpretation of variants in cancer

    Malachi Griffith;Nicholas C. Spies;Kilannin Krysiak;Joshua F. McMichael

  • Expression analysis of G Protein-Coupled Receptors in mouse macrophages.

    Jane E Lattin;Kate Schroder;Andrew I Su;John R Walker

  • A Genome-wide RNAi Screen for Modifiers of the Circadian Clock in Human Cells

    Eric E. Zhang;Eric E. Zhang;Andrew C. Liu;Andrew C. Liu;Tsuyoshi Hirota;Tsuyoshi Hirota;Loren J. Miraglia

  • Uncovering regulatory pathways that affect hematopoietic stem cell function using 'genetical genomics'.

    Leonid Bystrykh;Ellen Weersing;Bert Dontje;Sue Sutton

  • BioGPS: building your own mash-up of gene annotations and expression profiles

    Chunlei Wu;Xuefeng Jin;Ginger Tsueng;Cyrus Afrasiabi

  • BioGPS and MyGene.info: organizing online, gene-centric information

    Chunlei Wu;Ian MacLeod;Andrew I. Su

  • Genome-Wide Analysis of CREB Target Genes Reveals A Core Promoter Requirement for cAMP Responsiveness

    Michael D Conkright;Ernesto Guzmán;Lawrence Flechner;Andrew I Su

  • exRNA Atlas Analysis Reveals Distinct Extracellular RNA Cargo Types and Their Carriers Present across Human Biofluids

    Oscar D. Murillo;William Thistlethwaite;Joel Rozowsky;Sai Lakshmi Subramanian

  • Identification of Serum-Derived Sphingosine-1-Phosphate as a Small Molecule Regulator of YAP

    Eric Miller;Jiayi Yang;Michael DeRan;Chunlei Wu

  • Gene expression during the priming phase of liver regeneration after partial hepatectomy in mice

    Andrew I. Su;Luca G. Guidotti;John Paul Pezacki;Francis V. Chisari

  • Use of a dense single nucleotide polymorphism map for in silico mapping in the mouse.

    Mathew T Pletcher;Philip McClurg;Serge Batalov;Andrew I Su

Frequent Co-Authors

Peter G. Schultz
Peter G. Schultz Scripps Research Institute
Tim Wiltshire
Tim Wiltshire University of North Carolina at Chapel Hill
John B. Hogenesch
John B. Hogenesch Cincinnati Children's Hospital Medical Center
Martin Lotz
Martin Lotz Scripps Research Institute
Obi L. Griffith
Obi L. Griffith Washington University in St. Louis
Serge Batalov
Serge Batalov Genomics Institute of the Novartis Research Foundation
Egon Willighagen
Egon Willighagen Maastricht University
John Paul Pezacki
John Paul Pezacki University of Ottawa
Alexander R. Pico
Alexander R. Pico Gladstone Institutes
Ali Torkamani
Ali Torkamani Scripps Health

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