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Biology and Biochemistry

D-Index
53
Citations
14900
World Ranking
15957
National Ranking
299

Overview

Alban Ramette is affiliated with the University of Bern in Switzerland. Their research spans multiple fields with a predominant focus on Medicine and Biochemistry, Genetics and Molecular Biology. The scientist's work includes significant contributions to subfields such as Infectious Diseases, Molecular Biology, Epidemiology, Clinical Biochemistry, and Ecology.

Ramette's research addresses a broad range of topics including SARS-CoV-2 and COVID-19 research, bacterial identification and susceptibility testing, viral gastroenteritis research and epidemiology, bacteriophages and microbial interactions, HIV/AIDS research and interventions, SARS-CoV-2 detection and testing, as well as genomics and phylogenetic studies.

The researcher has published extensively in well-known venues. Frequent publication outlets include bioRxiv (Cold Spring Harbor Laboratory), Zenodo (CERN European Organization for Nuclear Research), The Journal of Infectious Diseases, Microbial Genomics, and the Journal of Clinical Microbiology.

Some recent papers authored or co-authored by Alban Ramette include:

  • Evaluation of primer pairs for microbiome profiling from soils to humans within the One Health framework (2020), Molecular Ecology Resources
  • Epidemiology of Human Adenoviruses: A 20-Year Retrospective Observational Study in Hospitalized Patients in Bern, Switzerland (2020), Clinical Epidemiology
  • SARS-CoV-2 N501Y Introductions and Transmissions in Switzerland from Beginning of October 2020 to February 2021-Implementation of Swiss-Wide Diagnostic Screening and Whole Genome Sequencing (2021), Microorganisms
  • Ongoing toxin-positive diphtheria outbreaks in a federal asylum centre in Switzerland, analysis July to September 2022 (2022), Eurosurveillance
  • Temporal and regional incidence of carbapenemase-producing Enterobacterales, Switzerland, 2013 to 2018 (2021), Eurosurveillance

In collaboration efforts, Ramette frequently works with a group of co-authors including Michael Huber, Roger D. Kouyos, Sabine Yerly, Hans H. Hirsch, and Matthias Cavassini. Each of these collaborators has worked with Ramette on multiple publications, indicating ongoing research partnerships.

Best Publications

  • Multivariate analyses in microbial ecology.

    Alban Nicolas Ramette

  • The bacterial species definition in the genomic era

    Konstantinos T Konstantinidis;Alban Ramette;James M Tiedje

  • Spatial patterns and links between microbial community composition and function in cyanobacterial mats

    Mohammad A. A. Al-Najjar;Mohammad A. A. Al-Najjar;Alban Nicolas Ramette;Michael Kühl;Michael Kühl;Waleed Hamza

  • Global patterns of bacterial beta-diversity in seafloor and seawater ecosystems.

    Lucie Zinger;Linda A. Amaral-Zettler;Jed A. Fuhrman;M. Claire Horner-Devine

  • Determinants of the distribution of nitrogen-cycling microbial communities at the landscape scale

    D Bru;Alban Nicolas Ramette;N P A Saby;S Dequiedt;S Dequiedt

  • Multiscale responses of microbial life to spatial distance and environmental heterogeneity in a patchy ecosystem.

    Alban Nicolas Ramette;J. M. Tiedje

  • Burkholderia xenovorans LB400 harbors a multi-replicon, 9.73-Mbp genome shaped for versatility

    Patrick S. G. Chain;Vincent J. Denef;Konstantinos T. Konstantinidis;Konstantinos T. Konstantinidis;Lisa M. Vergez;Lisa M. Vergez

  • A guide to statistical analysis in microbial ecology: a community-focused, living review of multivariate data analyses

    Pier Luigi Buttigieg;Alban Nicolas Ramette

  • Site and plant species are important determinants of the Methylobacterium community composition in the plant phyllosphere

    Claudia Knief;Claudia Knief;Alban Nicolas Ramette;Lisa Frances;Carlos Alonso-Blanco

  • Pseudomonas protegens sp. nov., widespread plant-protecting bacteria producing the biocontrol compounds 2,4-diacetylphloroglucinol and pyoluteorin.

    Alban Ramette;Michele Frapolli;Marion Fischer-Le Saux;Christelle Gruffaz

  • Global dispersion and local diversification of the methane seep microbiome

    S. Emil Ruff;Jennifer F. Biddle;Andreas P. Teske;Katrin Knittel

  • Biogeography: an emerging cornerstone for understanding prokaryotic diversity, ecology, and evolution.

    Alban Nicolas Ramette;Alban Nicolas Ramette;James M. Tiedje

  • Quantitative community fingerprinting methods for estimating the abundance of operational taxonomic units in natural microbial communities.

    Alban Nicolas Ramette

  • Phylogeny of HCN synthase-encoding hcnBC genes in biocontrol fluorescent pseudomonads and its relationship with host plant species and HCN synthesis ability

    Alban Nicolas Ramette;Michele Frapolli;Geneviève Défago;Yvan Moënne-Loccoz

  • Diversity and dynamics of rare and of resident bacterial populations in coastal sands

    Angélique Gobet;Angélique Gobet;Angélique Gobet;Simone I Böer;Susan M Huse;Justus E E van Beusekom

  • Bacterial diversity and biogeography in deep-sea surface sediments of the South Atlantic Ocean.

    Regina Schauer;Christina Bienhold;Alban Nicolas Ramette;Jens Harder

  • Toward a More Robust Assessment of Intraspecies Diversity, Using Fewer Genetic Markers

    Konstantinos T. Konstantinidis;Alban Ramette;James M. Tiedje

  • Impact of natural oil and higher hydrocarbons on microbial diversity, distribution, and activity in Gulf of Mexico cold-seep sediments

    Beth N. Orcutt;Samantha B. Joye;Sara Kleindienst;Katrin Knittel

  • Microbial and chemical characterization of underwater fresh water springs in the Dead Sea.

    Danny Ionescu;Christian-Helge Siebert;Lubos Polerecky;Yaniv Y. Munwes

  • Time- and sediment depth-related variations in bacterial diversity and community structure in subtidal sands.

    Simone I Böer;Stefanie I C Hedtkamp;Justus E E van Beusekom;Jed A Fuhrman

Frequent Co-Authors

Antje Boetius
Antje Boetius Max Planck Society
Frank Wenzhöfer
Frank Wenzhöfer Max Planck Institute for Marine Microbiology
Dirk de Beer
Dirk de Beer Max Planck Society
Claudia E. Kuehni
Claudia E. Kuehni University of Bern
Stephen L. Leib
Stephen L. Leib University of Bern
Ann Vanreusel
Ann Vanreusel Ghent University
Thomas Soltwedel
Thomas Soltwedel Alfred Wegener Institute for Polar and Marine Research
James M. Tiedje
James M. Tiedje Michigan State University
Gunter Wegener
Gunter Wegener Max Planck Society
Yvan Moënne-Loccoz
Yvan Moënne-Loccoz Claude Bernard University Lyon 1

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