Wei Shi

Overview

Best Publications

• limma powers differential expression analyses for RNA-sequencing and microarray studies

  Matthew E. Ritchie;Belinda Phipson;Di Wu;Yifang Hu

  31652
  Citations

• featureCounts: an efficient general-purpose program for assigning sequence reads to genomic features

  Yang Liao;Gordon K. Smyth;Wei Shi

  20491
  Citations

• voom: precision weights unlock linear model analysis tools for RNA-seq read counts

  Charity W Law;Charity W Law;Yunshun Chen;Yunshun Chen;Wei Shi;Wei Shi;Gordon K Smyth;Gordon K Smyth

  5674
  Citations

• The Subread aligner: fast, accurate and scalable read mapping by seed-and-vote

  Yang Liao;Gordon K. Smyth;Wei Shi

  2820
  Citations

• The R package Rsubread is easier, faster, cheaper and better for alignment and quantification of RNA sequencing reads.

  Yang Liao;Yang Liao;Gordon K Smyth;Gordon K Smyth;Wei Shi;Wei Shi

  2204
  Citations

• SARS-CoV-2 mRNA vaccine design enabled by prototype pathogen preparedness.

  Kizzmekia S. Corbett;Darin K. Edwards;Sarah R. Leist;Olubukola M. Abiona

  1589
  Citations

• Structural basis for broad and potent neutralization of HIV-1 by antibody VRC01.

  Tongqing Zhou;Ivelin Georgiev;Xueling Wu;Zhi Yong Yang

  1405
  Citations

• Immunogenicity and structures of a rationally designed prefusion MERS-CoV spike antigen

  Jesper Pallesen;Nianshuang Wang;Kizzmekia S. Corbett;Daniel Wrapp

  1137
  Citations

• Evaluation of the mRNA-1273 Vaccine against SARS-CoV-2 in Nonhuman Primates.

  Kizzmekia S Corbett;Barbara Flynn;Kathryn E Foulds;Joseph R Francica

  1112
  Citations

• A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium

  Zhenqiang Su;Paweł P. Łabaj;Sheng Li;Jean Thierry-Mieg

  1015
  Citations

• Hobit and Blimp1 instruct a universal transcriptional program of tissue residency in lymphocytes.

  Laura K. Mackay;Laura K. Mackay;Martina Minnich;Natasja A. M. Kragten;Yang Liao;Yang Liao

  990
  Citations

• The transcription factors Blimp-1 and IRF4 jointly control the differentiation and function of effector regulatory T cells

  Erika Cretney;Annie Xin;Annie Xin;Wei Shi;Wei Shi;Martina Minnich

  716
  Citations

• The transcriptional regulators IRF4, BATF and IL-33 orchestrate development and maintenance of adipose tissue-resident regulatory T cells

  Ajithkumar Vasanthakumar;Kazuyo Moro;Annie Xin;Yang Liao

  575
  Citations

• mRNA-1273 vaccine induces neutralizing antibodies against spike mutants from global SARS-CoV-2 variants

  Kai Wu;Anne P. Werner;Juan I. Moliva;Matthew Koch

  523
  Citations

• Transcription factor IRF4 Promotes CD8 + T cell exhaustion and limits the development of memory-like T cells during chronic infection

  Kevin Man;Sarah S. Gabriel;Yang Liao;Yang Liao;Renee Gloury;Renee Gloury

  498
  Citations

• The transcription factor IRF4 is essential for TCR affinity–mediated metabolic programming and clonal expansion of T cells

  Kevin Man;Maria Miasari;Maria Miasari;Wei Shi;Wei Shi;Annie Xin;Annie Xin

  439
  Citations

• Detecting and correcting systematic variation in large-scale RNA sequencing data

  Sheng Li;Paweł P Łabaj;Paul Zumbo;Peter Sykacek

  427
  Citations

• Protective monotherapy against lethal Ebola virus infection by a potently neutralizing antibody

  Davide Corti;John Misasi;Sabue Mulangu;Daphne A. Stanley

  416
  Citations

• Serum Neutralizing Activity Elicited by mRNA-1273 Vaccine.

  Kai Wu;Anne P Werner;Matthew Koch;Angela Choi

  412
  Citations

• Transcriptional profiling of mouse B cell terminal differentiation defines a signature for antibody-secreting plasma cells

  Wei Shi;Yang Liao;Simon N Willis;Nadine Taubenheim

  402
  Citations