His main research concerns Genome, Genetics, Computational biology, Genomics and Phylogenetics. While working on this project, he studies both Genome and Ladderane. His Computational biology research is multidisciplinary, relying on both Proteome, Functional genes, Taxonomic rank, GenBank and Metagenomics.
His studies deal with areas such as Sequence alignment and Profiling as well as Metagenomics. His studies in Genomics integrate themes in fields like Evolutionary biology and Genome project. His work deals with themes such as Heat shock protein, Ecology, Pyrosequencing, Chaperone and Exon, which intersect with Phylogenetics.
The scientist’s investigation covers issues in Genome, Genetics, Gene, Metagenomics and Computational biology. Genome is closely attributed to Evolutionary biology in his research. His work in Gene covers topics such as Microbiology which are related to areas like Virulence, Escherichia coli, Listeria monocytogenes and Chlamydiae.
Thomas Rattei focuses mostly in the field of Metagenomics, narrowing it down to matters related to Ecology and, in some cases, Archaea. His research in Computational biology tackles topics such as Sequence which are related to areas like Protein sequencing. His Genomics research focuses on Annotation and how it relates to Genome project and Information retrieval.
Thomas Rattei mainly investigates Metagenomics, Genome, Evolutionary biology, Gene and Computational biology. His Metagenomics research is multidisciplinary, incorporating perspectives in Microbiome, Candidatus, Archaea and Desulfosporosinus. The subject of his Archaea research is within the realm of Genetics.
His work on Whole genome sequencing and Genomics as part of general Genome study is frequently linked to Ecophysiology, bridging the gap between disciplines. His Evolutionary biology research integrates issues from Phylogenetics, Clade, Strain and Mobile genetic elements. His Computational biology study also includes fields such as
Thomas Rattei mainly focuses on Metagenomics, Genome, Evolutionary biology, Computational biology and Archaea. Thomas Rattei combines subjects such as Microbiome, Ecology, Host and Actinobacteria with his study of Metagenomics. His research in Genome intersects with topics in Bacteriophage and Nutrient.
As part of the same scientific family, he usually focuses on Evolutionary biology, concentrating on Phylogenetics and intersecting with Equus, Domestication and Y chromosome. His research integrates issues of Genome project, Sequence analysis, Whole genome sequencing and Genomics in his study of Computational biology. His Genetics research incorporates themes from Protease and Sponge.
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Genome sequencing and analysis of the model grass Brachypodium distachyon
John P. Vogel;David F. Garvin;Todd C. Mockler;Jeremy Schmutz.
eggNOG 4.5: a hierarchical orthology framework with improved functional annotations for eukaryotic, prokaryotic and viral sequences
Jaime Huerta-Cepas;Damian Szklarczyk;Damian Szklarczyk;Kristoffer Forslund;Helen Cook.
Nucleic Acids Research (2016)
Complete nitrification by Nitrospira bacteria
Holger Daims;Elena V. Lebedeva;Petra Pjevac;Ping Han.
Deciphering the evolution and metabolism of an anammox bacterium from a community genome
Marc Strous;Eric Pelletier;Sophie Mangenot;Thomas Rattei.
The dynamic genome of Hydra
Jarrod A. Chapman;Ewen F. Kirkness;Oleg Simakov;Oleg Simakov;Steven E. Hampson.
Gepard: a rapid and sensitive tool for creating dotplots on genome scale.
Jan Krumsiek;Roland Arnold;Thomas Rattei.
A Nitrospira metagenome illuminates the physiology and evolution of globally important nitrite-oxidizing bacteria
Sebastian Lücker;Michael Wagner;Frank Maixner;Eric Pelletier.
Proceedings of the National Academy of Sciences of the United States of America (2010)
Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
Robert M. Bowers;Nikos C. Kyrpides;Ramunas Stepanauskas;Miranda Harmon-Smith.
Nature Biotechnology (2018)
Distinct gene set in two different lineages of ammonia-oxidizing archaea supports the phylum Thaumarchaeota.
Anja Spang;Roland Hatzenpichler;Céline Brochier-Armanet;Thomas Rattei;Thomas Rattei.
Trends in Microbiology (2010)
eggNOG v3.0: orthologous groups covering 1133 organisms at 41 different taxonomic ranges
Sean Powell;Damian Szklarczyk;Kalliopi Trachana;Alexander Roth.
Nucleic Acids Research (2012)
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