Yuji Nagata

Yuji Nagata publication distribution in Microbiology in 2026

The chart shows the distribution of publications by all Research.com ranked scientists in the field of Microbiology in 2026. The highlighted bar marks where Yuji Nagata sits on this spectrum.

Yuji Nagata D-index placement in Microbiology in 2026

The chart shows the D-index (discipline H-index) distribution of Microbiology scientists ranked by Research.com in 2026. The highlighted bar marks where Yuji Nagata sits on this spectrum.

Best Publications

• GenomeMatcher: A graphical user interface for DNA sequence comparison

  Yoshiyuki Ohtsubo;Wakako Ikeda-Ohtsubo;Yuji Nagata;Masataka Tsuda

  299
  Citations

• Aerobic degradation of lindane (γ-hexachlorocyclohexane) in bacteria and its biochemical and molecular basis

  Yuji Nagata;Ryo Endo;Michihiro Ito;Yoshiyuki Ohtsubo

  267
  Citations

• Complete analysis of genes and enzymes for γ-hexachlorocyclohexane degradation in Sphingomonas paucimobilis UT26

  Y Nagata;K Miyauchi;M Takagi

  250
  Citations

• Modification of activity and specificity of haloalkane dehalogenase from Sphingomonas paucimobilis UT26 by engineering of its entrance tunnel

  Radka Chaloupková;Jana Sýkorová;Zbyňek Prokop;Andrea Jesenská

  199
  Citations

• Purification and characterization of a haloalkane dehalogenase of a new substrate class from a gamma-hexachlorocyclohexane-degrading bacterium, Sphingomonas paucimobilis UT26.

  Yuji Nagata;Keisuke Miyauchi;Jiri Damborsky;Katka Manova

  196
  Citations

• Crystal Structure of the Haloalkane Dehalogenase from Sphingomonas paucimobilis UT26

  J Marek;J Vevodova;I.K Smatanova;I.K Smatanova;Y Nagata

  183
  Citations

• Cloning and Sequencing of a Novel meta-Cleavage Dioxygenase Gene Whose Product Is Involved in Degradation of γ-Hexachlorocyclohexane in Sphingomonas paucimobilis

  Keisuke Miyauchi;Yugo Adachi;Yuji Nagata;Masamichi Takagi

  156
  Citations

• Complete genome sequence of Acidovorax sp. strain KKS102, a polychlorinated-biphenyl degrader.

  Yoshiyuki Ohtsubo;Fumito Maruyama;Hisayuki Mitsui;Yuji Nagata

  150
  Citations

• Cloning and Sequencing of a 2,5-Dichlorohydroquinone Reductive Dehalogenase Gene Whose Product Is Involved in Degradation of γ-Hexachlorocyclohexane by Sphingomonas paucimobilis

  Keisuke Miyauchi;Seug Kyo Suh;Yuji Nagata;Masamichi Takagi

  146
  Citations

• Strategies for bioremediation of polychlorinated biphenyls

  Yoshiyuki Ohtsubo;Toshiaki Kudo;Masataka Tsuda;Yuji Nagata

  146
  Citations

• Enantioselectivity of Haloalkane Dehalogenases and its Modulation by Surface Loop Engineering

  Zbynek Prokop;Yukari Sato;Jan Brezovsky;Tomas Mozga

  139
  Citations

• Catalytic mechanism of the haloalkane dehalogenase LinB from Sphingomonas paucimobilis UT26

  Zbyněk Prokop;Marta Monincová;Radka Chaloupková;Martin Klvaňa

  133
  Citations

• Nucleotide sequence and functional analysis of the meta-cleavage pathway involved in biphenyl and polychlorinated biphenyl degradation in Pseudomonas sp. strain KKS102.

  Y Kikuchi;Y Yasukochi;Y Nagata;M Fukuda

  129
  Citations

• Crystal Structure of Haloalkane Dehalogenase LinB from Sphingomonas paucimobilis UT26 at 0.95 Å Resolution: Dynamics of Catalytic Residues

  Aaron J. Oakley;Martin Klvaňa;Michal Otyepka;Yuji Nagata

  126
  Citations

• Two different types of dehalogenases, LinA and LinB, involved in γ- hexachlorocyclohexane degradation in Sphingomonas paucimobilis UT26 are localized in the periplasmic space without molecular processing

  Yuji Nagata;Akiko Futamura;Keisuke Miyauchi;Masamichi Takagi

  120
  Citations

• Isolation and characterization of naphthalene-catabolic genes and plasmids from oil-contaminated soil by using two cultivation-independent approaches

  Akira Ono;Ryo Miyazaki;Masahiro Sota;Masahiro Sota;Yoshiyuki Ohtsubo

  120
  Citations

• Two rhizobial strains, Mesorhizobium loti MAFF303099 and Bradyrhizobium japonicum USDA110, encode haloalkane dehalogenases with novel structures and substrate specificities.

  Yukari Sato;Marta Monincova;Radka Chaloupkova;Zbynek Prokop

  112
  Citations

• Dehydrochlorination of γ-Hexachlorocyclohexane (γ-BHC) by γ-BHC-Assimilating Pseudomonas paucimobilis

  Ryozo Imai;Yuji Nagata;Keishi Senoo;Hidenori Wada

  107
  Citations

• Identification and Characterization of Genes Involved in the Downstream Degradation Pathway of γ-Hexachlorocyclohexane in Sphingomonas paucimobilis UT26

  Ryo Endo;Mayuko Kamakura;Keisuke Miyauchi;Masao Fukuda

  106
  Citations

• Halide-Stabilizing Residues of Haloalkane Dehalogenases Studied by Quantum Mechanic Calculations and Site-Directed Mutagenesis†

  Michal Boháč;Yuji Nagata;Zbyněk Prokop;Martin Prokop

  106
  Citations