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Genetics

D-Index
64
Citations
29562
World Ranking
2742
National Ranking
111

Overview

Timothy Ravasi is affiliated with the Okinawa Institute of Science and Technology in Japan. Their research primarily focuses on Environmental Science, with significant contributions in the subfields of Ecology, Oceanography, Global and Planetary Change, Molecular Biology, and Immunology.

The topics of research that Timothy Ravasi has extensively covered include:

  • Coral and Marine Ecosystems Studies
  • Ocean Acidification Effects and Responses
  • Physiological and biochemical adaptations
  • Marine Bivalve and Aquaculture Studies
  • Aquaculture disease management and microbiota
  • Animal Behavior and Reproduction
  • Fish Ecology and Management Studies

Timothy Ravasi has published in several notable venues, with the highest number of contributions appearing in bioRxiv (Cold Spring Harbor Laboratory). Other frequent publication outlets include Frontiers in Marine Science, SSRN Electronic Journal, Molecular Ecology, and Scientific Reports.

Recent papers authored or co-authored by Timothy Ravasi include:

  • Species-specific molecular responses of wild coral reef fishes during a marine heatwave, 2020, Science Advances
  • Methods matter in repeating ocean acidification studies, 2020, Nature
  • The effects of climate change on the ecology of fishes, 2023, PLOS Climate
  • Magnetic core-shell nanowires as MRI contrast agents for cell tracking, 2020, Journal of Nanobiotechnology
  • An Epigenetic Signature for Within-Generational Plasticity of a Reef Fish to Ocean Warming, 2020, Frontiers in Marine Science

The scientist frequently collaborates with several researchers, including:

  • Celia Schunter
  • Philip L. Munday
  • Jennifer M. Donelson
  • Michael Izumiyama
  • Roger Huerlimann

Best Publications

  • Interferon-γ: an overview of signals, mechanisms and functions

    Kate Schroder;Paul John Hertzog;Timothy Ravasi;David A Hume

  • The Transcriptional Landscape of the Mammalian Genome

    P. Carninci;T. Kasukawa;S. Katayama;J. Gough

  • Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs

    Y. Okazaki;M. Furuno;T. Kasukawa;J. Adachi

  • A promoter-level mammalian expression atlas

    Alistair R.R. Forrest;Hideya Kawaji;Michael Rehli;J. Kenneth Baillie

  • Antisense Transcription in the Mammalian Transcriptome

    S. Katayama;Y. Tomaru;T. Kasukawa;K. Waki

  • Genome-wide analysis of mammalian promoter architecture and evolution

    Piero Carninci;Albin Sandelin;Boris Lenhard;Boris Lenhard;Shintaro Katayama

  • An Atlas of Combinatorial Transcriptional Regulation in Mouse and Man

    Timothy Ravasi;Harukazu Suzuki;Carlo Vittorio Cannistraci;Shintaro Katayama

  • Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome

    Timothy Ravasi;Harukazu Suzuki;Ken C. Pang;Shintaro Katayama

  • The mononuclear phagocyte system revisited.

    David A. Hume;Ian L. Ross;S. Roy Himes;R. Tedjo Sasmono

  • The transcriptional network that controls growth arrest and differentiation in a human myeloid leukemia cell line

    Harukazu Suzuki;Alistair R.R. Forrest;Erik Van Nimwegen;Carsten O. Daub

  • From link-prediction in brain connectomes and protein interactomes to the local-community-paradigm in complex networks

    Carlo Vittorio Cannistraci;Gregorio Alanis-Lobato;Gregorio Alanis-Lobato;Timothy Ravasi;Timothy Ravasi

  • Genomes of coral dinoflagellate symbionts highlight evolutionary adaptations conducive to a symbiotic lifestyle

    Manuel Aranda;Yangyang Li;Yi Jin Liew;Sebastian Baumgarten

  • Gpnmb is induced in macrophages by IFN-gamma and lipopolysaccharide and acts as a feedback regulator of proinflammatory responses.

    Vera M. Ripoll;Katharine M. Irvine;Timothy Ravasi;Matthew J. Sweet;Matthew J. Sweet

  • A genomic view of the reef-building coral Porites lutea and its microbial symbionts.

    Steven J. Robbins;Caitlin M. Singleton;Cheong Xin Chan;Lauren F. Messer

  • LPS regulates proinflammatory gene expression in macrophages by altering histone deacetylase expression

    Hnin Thanda Aung;Kate Schroder;Stewart R. Himes;Kristian Brion

  • The sponge microbiome project

    Lucas Moitinho-Silva;Shaun Nielsen;Amnon Amir;Antonio Gonzalez

  • Probing the S100 protein family through genomic and functional analysis.

    Timothy Ravasi;Kenneth Hsu;Jesse Goyette;Kate Schroder

  • Histone deacetylase inhibitors decrease Toll-like receptor-mediated activation of proinflammatory gene expression by impairing transcription factor recruitment

    Konrad A. Bode;Kate Schroder;David A. Hume;Timothy Ravasi

  • Transcript annotation in FANTOM3: mouse gene catalog based on physical cDNAs.

    Norihiro Maeda;Takeya Kasukawa;Rieko Oyama;Julian Gough

  • Pirfenidone Is Renoprotective in Diabetic Kidney Disease

    Satish P. RamachandraRao;Yanqing Zhu;Timothy Ravasi;Tracy A. McGowan

Frequent Co-Authors

David A. Hume
David A. Hume University of Queensland
Christine A. Wells
Christine A. Wells University of Melbourne
Matthew J. Sweet
Matthew J. Sweet University of Queensland
Sean M. Grimmond
Sean M. Grimmond University of Melbourne
Alistair R. R. Forrest
Alistair R. R. Forrest Harry Perkins Institute of Medical Research
Vladimir B. Bajic
Vladimir B. Bajic King Abdullah University of Science and Technology
Jesper Tegnér
Jesper Tegnér King Abdullah University of Science and Technology
Boris Lenhard
Boris Lenhard Imperial College London

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