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Takafumi Yamashino

Takafumi Yamashino

D-Index & Metrics

Biology and Biochemistry

D-Index
62
Citations
11489
World Ranking
10978
National Ranking
751

Overview

Takafumi Yamashino is affiliated with Nagoya University in Japan and has contributed extensively to the fields of Agricultural and Biological Sciences as well as Biochemistry, Genetics, and Molecular Biology. Their research primarily focuses on plant molecular biology, with particular attention to areas such as light effects on plants, plant nutrient uptake and metabolism, and plant reproductive biology.

The scientist has published work across several prominent venues. Frequent publication venues include:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Biochemical and Biophysical Research Communications
  • Nature Communications
  • Current Biology
  • Life Science Alliance

The following recent papers authored or co-authored by Takafumi Yamashino demonstrate a range of topics and publication years:

  • "A hierarchical transcriptional network activates specific CDK inhibitors that regulate G2 to control cell size and number in Arabidopsis," 2022, Nature Communications
  • "Patterned proliferation orients tissue-wide stress to control root vascular symmetry in Arabidopsis," 2023, Current Biology
  • "The mRNA decapping machinery targets LBD3/ASL9 to mediate apical hook and lateral root development," 2023, Life Science Alliance
  • "Red light-regulated interaction of Per-Arnt-Sim histidine kinases with partner histidine-containing phosphotransfer proteins in Physcomitrium patens," 2021, Genes to Cells
  • "A Small-Molecule Modulator Affecting the Clock-Associated PSEUDO-RESPONSE REGULATOR 7 Amount," 2023, Plant and Cell Physiology

The scientist collaborates frequently with several researchers, including:

  • Miyu Imamura
  • Shu Anami
  • Yuji Nomoto
  • Hirotomo Takatsuka
  • Kesuke Yamada

Their published work covers a wide array of specialized topics:

  • Plant Molecular Biology Research
  • Light effects on plants
  • Plant nutrient uptake and metabolism
  • Plant Reproductive Biology
  • Marine and coastal plant biology
  • Plant Gene Expression Analysis
  • Polysaccharides and Plant Cell Walls

Subfields of their research include Plant Science, Molecular Biology, and Oceanography. The ongoing academic contributions of Takafumi Yamashino provide insight into plant development mechanisms, environmental responses, and molecular regulatory networks within plant biology.

Best Publications

  • The arabidopsis AHK4 histidine kinase is a cytokinin-binding receptor that transduces cytokinin signals across the membrane

    Hisami Yamada;Tomomi Suzuki;Kazunori Terada;Kentaro Takei

  • PSEUDO-RESPONSE REGULATORS, PRR9, PRR7 and PRR5, together play essential roles close to the circadian clock of Arabidopsis thaliana.

    Norihito Nakamichi;Masanori Kita;Shogo Ito;Takafumi Yamashino

  • The APRR1/TOC1 Quintet Implicated in Circadian Rhythms of Arabidopsis thaliana: I. Characterization with APRR1-Overexpressing Plants

    Akinori Matsushika;Seiya Makino;Masaya Kojima;Takafumi Yamashino

  • Three Type-B Response Regulators, ARR1, ARR10, and ARR12 Play Essential but Redundant Roles in Cytokinin Signal Transduction Throughout the Life Cycle of Arabidopsis thaliana

    Kai Ishida;Takafumi Yamashino;Akihiro Yokoyama;Takeshi Mizuno

  • Transcript profiling of an Arabidopsis PSEUDO RESPONSE REGULATOR arrhythmic triple mutant reveals a role for the circadian clock in cold stress response.

    Norihito Nakamichi;Miyako Kusano;Atsushi Fukushima;Masanori Kita

  • Transcriptional repressor PRR5 directly regulates clock-output pathways.

    Norihito Nakamichi;Takatoshi Kiba;Mari Kamioka;Takamasa Suzuki

  • Type-B ARR Transcription Factors, ARR10 and ARR12, are Implicated in Cytokinin-Mediated Regulation of Protoxylem Differentiation in Roots of Arabidopsis thaliana

    Akihiro Yokoyama;Takafumi Yamashino;Yu-Ichiro Amano;Yoshinori Tajima

  • Arabidopsis Clock-Associated Pseudo-Response Regulators PRR9, PRR7 and PRR5 Coordinately and Positively Regulate Flowering Time Through the Canonical CONSTANS-Dependent Photoperiodic Pathway

    Norihito Nakamichi;Masanori Kita;Kanae Niinuma;Shogo Ito

  • The Circadian Clock Regulates the Photoperiodic Response of Hypocotyl Elongation through a Coincidence Mechanism in Arabidopsis thaliana

    Yusuke Niwa;Takafumi Yamashino;Takeshi Mizuno

  • Ambient Temperature Signal Feeds into the Circadian Clock Transcriptional Circuitry Through the EC Night-Time Repressor in Arabidopsis thaliana

    Takeshi Mizuno;Yuji Nomoto;Haruka Oka;Miki Kitayama

  • A Link between Circadian-Controlled bHLH Factors and the APRR1/TOC1 Quintet in Arabidopsis thaliana

    Takafumi Yamashino;Akinori Matsushika;Toru Fujimori;Shusei Sato

  • Quantitative control of the stationary phase-specific sigma factor, sigma S, in Escherichia coli: involvement of the nucleoid protein H-NS.

    T Yamashino;C Ueguchi;T Mizuno

  • Circadian-controlled basic/helix-loop-helix factor, PIL6, implicated in light-signal transduction in Arabidopsis thaliana.

    Toru Fujimori;Takafumi Yamashino;Takahiko Kato;Takeshi Mizuno

  • The evolutionarily conserved OsPRR quintet: rice pseudo-response regulators implicated in circadian rhythm.

    Masaya Murakami;Motoyuki Ashikari;Kotaro Miura;Takafumi Yamashino

  • Genome-Wide Analyses Revealing a Signaling Network of the RcsC-YojN-RcsB Phosphorelay System in Escherichia coli

    Daisuke Hagiwara;Masahito Sugiura;Taku Oshima;Hirotada Mori

  • Comparative overviews of clock-associated genes of Arabidopsis thaliana and Oryza sativa

    Masaya Murakami;Yasuhiro Tago;Takafumi Yamashino;Takeshi Mizuno

  • Combinatorial Microarray Analysis Revealing Arabidopsis Genes Implicated in Cytokinin Responses through the His→Asp Phosphorelay Circuitry

    Takatoshi Kiba;Takahito Naitou;Nobuya Koizumi;Takafumi Yamashino

  • The Type-A Response Regulator, ARR15, Acts as a Negative Regulator in the Cytokinin-Mediated Signal Transduction in Arabidopsis thaliana

    Takatoshi Kiba;Hisami Yamada;Shusei Sato;Tomohiko Kato

  • Comparative Transcriptome of Diurnally Oscillating Genes and Hormone-Responsive Genes in Arabidopsis thaliana : Insight into Circadian Clock-Controlled Daily Responses to Common Ambient Stresses in Plants

    Takeshi Mizuno;Takafumi Yamashino

  • Comparative genetic studies on the APRR5 and APRR7 genes belonging to the APRR1/TOC1 quintet implicated in circadian rhythm, control of flowering time, and early photomorphogenesis.

    Yoko Yamamoto;Eriko Sato;Tomo Shimizu;Norihito Nakamich

Frequent Co-Authors

Takeshi Mizuno
Takeshi Mizuno Nagoya University
Takatoshi Kiba
Takatoshi Kiba Nagoya University
Hitoshi Sakakibara
Hitoshi Sakakibara Nagoya University
Michio Ohta
Michio Ohta Nagoya University
Shusei Sato
Shusei Sato Tohoku University
Tomohiko Kato
Tomohiko Kato Kazusa DNA Research Institute
Kristian Fog Nielsen
Kristian Fog Nielsen Technical University of Denmark
Mamoru Sugita
Mamoru Sugita Nagoya University
Motoyuki Ashikari
Motoyuki Ashikari Nagoya University
Akira Nagatani
Akira Nagatani Kyoto University

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