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Ryo Yamada

Ryo Yamada

D-Index & Metrics

Biology and Biochemistry

D-Index
70
Citations
19068
World Ranking
6952
National Ranking
466

Overview

Ryo Yamada is affiliated with Kyoto University in Japan and conducts research primarily in the intersecting fields of Medicine and Biochemistry, Genetics and Molecular Biology. Their work focuses on a range of subfields including Molecular Biology, Immunology, Civil and Structural Engineering, Nephrology, and Cardiology and Cardiovascular Medicine.

The scientist has contributed to topics such as Single-cell and spatial transcriptomics, Bioinformatics and Genomic Networks, Gene expression and cancer classification, Gene Regulatory Network Analysis, Structural Behavior of Reinforced Concrete, Structural Load-Bearing Analysis, and Immune Cell Function and Interaction.

Ryo Yamada's frequent co-authors include:

  • Motoko Yanagita
  • Daigo Okada
  • Fumihiko Matsuda
  • Takuya Morinishi
  • Koji Muro

Their publications often appear in the following journals and venues:

  • Journal of the American Society of Nephrology
  • Kidney International
  • Journal of Human Genetics
  • Journal of Structural and Construction Engineering (Transactions of AIJ)
  • bioRxiv (Cold Spring Harbor Laboratory)

Notable recent papers authored or co-authored by Ryo Yamada include:

  • Interpretation of omics data analyses, 2020, Journal of Human Genetics
  • Keratoconus-susceptibility gene identification by corneal thickness genome-wide association study and artificial intelligence IBM Watson, 2020, Communications Biology
  • Genome-wide association study of individual differences of human lymphocyte profiles using large-scale cytometry data, 2020, Journal of Human Genetics
  • Dissection of the polygenic architecture of neuronal Aβ production using a large sample of individual iPSC lines derived from Alzheimer's disease patients, 2022, Nature Aging
  • Data-driven comparison of multiple high-dimensional single-cell expression profiles, 2021, Journal of Human Genetics

Best Publications

  • Genetics of rheumatoid arthritis contributes to biology and drug discovery

    Yukinori Okada;Yukinori Okada;Di Wu;Di Wu;Di Wu;Gosia Trynka;Gosia Trynka;Towfique Raj;Towfique Raj

  • Functional haplotypes of PADI4, encoding citrullinating enzyme peptidylarginine deiminase 4, are associated with rheumatoid arthritis.

    Akari Suzuki;Ryo Yamada;Xiaotian Chang;Shinya Tokuhiro

  • Functional SNPs in the lymphotoxin-alpha gene that are associated with susceptibility to myocardial infarction.

    Kouichi Ozaki;Yozo Ohnishi;Aritoshi Iida;Akihiko Sekine

  • An intronic SNP in a RUNX1 binding site of SLC22A4, encoding an organic cation transporter, is associated with rheumatoid arthritis.

    Shinya Tokuhiro;Ryo Yamada;Xiaotian Chang;Akari Suzuki

  • A functional variant in FCRL3 , encoding Fc receptor-like 3, is associated with rheumatoid arthritis and several autoimmunities

    Yuta Kochi;Ryo Yamada;Akari Suzuki;John B. Harley;John B. Harley;John B. Harley

  • A high-throughput SNP typing system for genome-wide association studies.

    Yozo Ohnishi;Toshihiro Tanaka;Kouichi Ozaki;Ryo Yamada

  • Common and distinct clinical features in adult patients with anti-aminoacyl-tRNA synthetase antibodies: heterogeneity within the syndrome.

    Yasuhito Hamaguchi;Manabu Fujimoto;Takashi Matsushita;Kenzo Kaji

  • Meta-analysis identifies nine new loci associated with rheumatoid arthritis in the Japanese population

    Yukinori Okada;Chikashi Terao;Katsunori Ikari;Yuta Kochi

  • Gene-based SNP discovery as part of the Japanese Millennium Genome Project: identification of 190 562 genetic variations in the human genome

    Hisanori Haga;Ryo Yamada;Yozo Ohnishi;Yusuke Nakamura

  • A regulatory variant in CCR6 is associated with rheumatoid arthritis susceptibility.

    Yuta Kochi;Yukinori Okada;Akari Suzuki;Katsunori Ikari

  • Ethnic differences in allele frequency of autoimmune-disease-associated SNPs

    Mikako Mori;Ryo Yamada;Kyoko Kobayashi;Reimi Kawaida

  • Genetic Polymorphisms of the Human PNPLA3 Gene Are Strongly Associated with Severity of Non-Alcoholic Fatty Liver Disease in Japanese

    Takahisa Kawaguchi;Takahisa Kawaguchi;Yoshio Sumida;Atsushi Umemura;Keitaro Matsuo

  • Human genetic variation database, a reference database of genetic variations in the Japanese population.

    Koichiro Higasa;Noriko Miyake;Jun Yoshimura;Kohji Okamura

  • Localization of peptidylarginine deiminase 4 (PADI4) and citrullinated protein in synovial tissue of rheumatoid arthritis

    X Chang;R Yamada;A Suzuki;T Sawada

  • HLA-HD: An accurate HLA typing algorithm for next-generation sequencing data

    Shuji Kawaguchi;Koichiro Higasa;Masakazu Shimizu;Ryo Yamada

  • The FOXE1 locus is a major genetic determinant for radiation-related thyroid carcinoma in Chernobyl

    Meiko Takahashi;Vladimir A. Saenko;Tatiana I. Rogounovitch;Takahisa Kawaguchi

  • No association between complement factor H gene polymorphism and exudative age-related macular degeneration in Japanese.

    Norimoto Gotoh;Ryo Yamada;Hitomi Hiratani;Victor Renault

  • Two Susceptibility Loci to Takayasu Arteritis Reveal a Synergistic Role of the IL12B and HLA-B Regions in a Japanese Population

    Chikashi Terao;Hajime Yoshifuji;Akinori Kimura;Takayoshi Matsumura

  • Common variant in 6q26-q27 is associated with distal colon cancer in an Asian population

    R. Cui;Y. Okada;S. G. Jang;Ja-Lok Ku

  • A genome-wide association analysis identified a novel susceptible locus for pathological myopia at 11q24.1.

    Hideo Nakanishi;Ryo Yamada;Ryo Yamada;Norimoto Gotoh;Hisako Hayashi

Frequent Co-Authors

Fumihiko Matsuda
Fumihiko Matsuda Kyoto University
Yusuke Nakamura
Yusuke Nakamura National Institutes of Biomedical Innovation, Health and Nutrition
Nagahisa Yoshimura
Nagahisa Yoshimura Kyoto University
Tsuneyo Mimori
Tsuneyo Mimori Kyoto University
Yukinori Okada
Yukinori Okada Osaka University
Tatsuhiko Tsunoda
Tatsuhiko Tsunoda University of Tokyo
Keitaro Matsuo
Keitaro Matsuo Nagoya University

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