World's Best Scientists 2026 revealed!

D-Index & Metrics

Biology and Biochemistry

D-Index
58
Citations
10940
World Ranking
13292
National Ranking
501

Overview

Jean Armengaud is affiliated with the Atomic Energy and Alternative Energies Commission in France. Their research focuses primarily on the fields of Biochemistry, Genetics and Molecular Biology, with significant contributions also in Medicine. Key subfields of their work include Molecular Biology, Plant Science, Infectious Diseases, Spectroscopy, and Ecology.

The scientist's work covers a diverse range of main topics, including:

  • Advanced Proteomics Techniques and Applications
  • Genomics and Phylogenetic Studies
  • Microbial Community Ecology and Physiology
  • Bacillus and Francisella bacterial research
  • Metabolomics and Mass Spectrometry Studies
  • Gut microbiota and health
  • SARS-CoV-2 detection and testing

Jean Armengaud has been published frequently in several scientific venues. The most common publication venues include:

  • PROTEOMICS
  • bioRxiv (Cold Spring Harbor Laboratory)
  • Frontiers in Microbiology
  • Journal of Proteomics
  • Microorganisms

Their recent papers illustrate a wide scope of interests and collaborative work. Notable recent publications include:

  • "Roadmap for naming uncultivated Archaea and Bacteria" (2020, Nature Microbiology)
  • "Critical Assessment of MetaProteome Investigation (CAMPI): a multi-laboratory comparison of established workflows" (2021, Nature Communications)
  • "Proteotyping SARS-CoV-2 Virus from Nasopharyngeal Swabs: A Proof-of-Concept Focused on a 3 Min Mass Spectrometry Window" (2020, Journal of Proteome Research)
  • "The Metaproteomics Initiative: a coordinated approach for propelling the functional characterization of microbiomes" (2021, Microbiome)
  • "Metaproteomics to understand how microbiota function: The crystal ball predicts a promising future" (2022, Environmental Microbiology)

Jean Armengaud collaborates frequently with a group of co-authors who contribute to many joint publications. Regular collaborators include Olivier Pible, Lucia Grenga, Jean-Charles Gaillard, Guylaine Miotello, and Béatrice Alpha-Bazin.

In addition to journal articles, Jean Armengaud has contributed to book publications. One such work is the 2022 book titled "SARS-CoV-2," published by Springer Science+Business Media.

Best Publications

  • Clinical features and prognostic factors of listeriosis: the MONALISA national prospective cohort study.

    Caroline Charlier;Élodie Perrodeau;Alexandre Leclercq;Alexandre Leclercq;Benoît Cazenave

  • Low phosphate activates STOP1-ALMT1 to rapidly inhibit root cell elongation.

    Coline Balzergue;Thibault Dartevelle;Thibault Dartevelle;Thibault Dartevelle;Christian Godon;Christian Godon;Christian Godon;Edith Laugier;Edith Laugier;Edith Laugier

  • Genetic analysis of dioxin dioxygenase of Sphingomonas sp. Strain RW1: catabolic genes dispersed on the genome.

    Jean Armengaud;Birgitta Happe;Kenneth N. Timmis

  • Nutrient recycling facilitates long-term stability of marine microbial phototroph–heterotroph interactions

    Joseph Alexander Christie-Oleza;Despoina Sousoni;Matthew Lloyd;Jean Armengaud

  • Non-model organisms, a species endangered by proteogenomics.

    Jean Armengaud;Judith Trapp;Olivier Pible;Olivier Geffard

  • Alliance of proteomics and genomics to unravel the specificities of Sahara bacterium Deinococcus deserti.

    Arjan de Groot;Rémi Dulermo;Philippe Ortet;Laurence Blanchard

  • Genome analysis and genome-wide proteomics of Thermococcus gammatolerans, the most radioresistant organism known amongst the Archaea

    Yvan Zivanovic;Jean Armengaud;Arnaud Lagorce;Christophe Leplat

  • Roadmap for naming uncultivated Archaea and Bacteria

    Alison E. Murray;John Freudenstein;Simonetta Gribaldo;Roland Hatzenpichler

  • Ribosomal proteins as biomarkers for bacterial identification by mass spectrometry in the clinical microbiology laboratory.

    Stéphanie Suarez;Agnès Ferroni;Aurélie Lotz;Keith A. Jolley

  • Expanding the known repertoire of virulence factors produced by Bacillus cereus through early secretome profiling in three redox conditions

    Gérémy Clair;Stamatiki Roussi;Jean Armengaud;Catherine Duport;Catherine Duport

  • Proteomic insights into the lifestyle of an environmentally relevant marine bacterium

    Joseph Alexander Christie-Oleza;Bernard Fernandez;Balbina Nogales;Rafael Bosch

  • Implementation of meiosis prophase I programme requires a conserved retinoid-independent stabilizer of meiotic transcripts

    Emilie Abby;Sophie Tourpin;Jonathan Ribeiro;Katrin Daniel

  • A functional 4-hydroxysalicylate/hydroxyquinol degradative pathway gene cluster is linked to the initial dibenzo-p-dioxin pathway genes in Sphingomonas sp. strain RW1.

    Jean Armengaud;Kenneth N. Timmis;Rolf-Michael Wittich

  • RNA-binding proteins are a major target of silica nanoparticles in cell extracts.

    Géraldine Klein;Christelle Mathé;Mathilde Biola-Clier;Stéphanie Devineau

  • Exoproteomics: exploring the world around biological systems.

    Jean Armengaud;Joseph Alexander Christie-Oleza;Gérémy Clair;Véronique Malard

  • A perfect genome annotation is within reach with the proteomics and genomics alliance

    Jean Armengaud

  • Taking the shortcut for high-throughput shotgun proteomic analysis of bacteria.

    Erica Marie Hartmann;François Allain;Jean Charles Gaillard;Olivier Pible

  • Proteomics-based Refinement of Deinococcus deserti Genome Annotation Reveals an Unwonted Use of Non-canonical Translation Initiation Codons

    Mathieu Baudet;Philippe Ortet;Philippe Ortet;Jean-Charles Gaillard;Bernard Fernandez

  • Molecular Characterization of Fdx1, a Putidaredoxin-Type [2Fe-2S] Ferredoxin Able to Transfer Electrons to the Dioxin Dioxygenase of Sphingomonas sp. RW1

    Jean Armengaud;Kenneth N. Timmis

  • Comparative Proteogenomics of Twelve Roseobacter Exoproteomes Reveals Different Adaptive Strategies Among These Marine Bacteria

    Joseph Alexander Christie-Oleza;Juana Maria Piña-Villalonga;Rafael Bosch;Balbina Nogales

Frequent Co-Authors

Kenneth N. Timmis
Kenneth N. Timmis Technische Universität Braunschweig
Olivier Geffard
Olivier Geffard French Research Institute for Exploitation of the Sea
Henri Grosjean
Henri Grosjean Centre national de la recherche scientifique, CNRS
Yannick Guari
Yannick Guari Centre national de la recherche scientifique, CNRS
Frank E. Löffler
Frank E. Löffler University of Tennessee at Knoxville
David Pignol
David Pignol Aix-Marseille University
Patrick Forterre
Patrick Forterre University of Paris-Saclay
Valérie de Crécy-Lagard
Valérie de Crécy-Lagard University of Florida
Xavier Nassif
Xavier Nassif Université Paris Cité
Hans-Peter Klenk
Hans-Peter Klenk Newcastle University

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