Huixiao Hong

Overview

Best Publications

• The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

  Leming Shi;Laura H. Reid;Wendell D. Jones;Richard Shippy

  2470
  Citations

• The Microarray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models

  Leming Shi;Gregory Campbell;Wendell D. Jones;Fabien Campagne

  1213
  Citations

• A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium

  Zhenqiang Su;Paweł P. Łabaj;Sheng Li;Jean Thierry-Mieg

  1015
  Citations

• The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance

  Charles Wang;Binsheng Gong;Pierre R. Bushel;Jean Thierry-Mieg

  570
  Citations

• Study of 202 natural, synthetic, and environmental chemicals for binding to the androgen receptor.

  Hong Fang;Weida Tong;William S. Branham;Carrie L. Moland

  439
  Citations

• Comparison of RNA-seq and microarray-based models for clinical endpoint prediction.

  Wenqian Zhang;Ying Yu;Falk Hertwig;Falk Hertwig;Jean Thierry-Mieg

  437
  Citations

• Coumarin-based inhibitors of HIV integrase.

  He Zhao;Nouri Neamati;Huixiao Hong;Abhijit Mazumder

  411
  Citations

• The balance of reproducibility, sensitivity, and specificity of lists of differentially expressed genes in microarray studies

  Leming Shi;Wendell D. Jones;Roderick V. Jensen;Stephen C. Harris

  398
  Citations

• CERAPP: Collaborative Estrogen Receptor Activity Prediction Project

  Kamel Mansouri;Ahmed Abdelaziz;Aleksandra Rybacka;Alessandra Roncaglioni

  381
  Citations

• A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages.

  Ying Yu;James C. Fuscoe;Chen Zhao;Chao Guo

  371
  Citations

• A comparison of batch effect removal methods for enhancement of prediction performance using MAQC-II microarray gene expression data

  J. Luo;M. Schumacher;A. Scherer;D. Sanoudou

  349
  Citations

• Mold2, Molecular Descriptors from 2D Structures for Chemoinformatics and Toxicoinformatics

  Huixiao Hong;Qian Xie;Weigong Ge;Feng Qian

  340
  Citations

• Depsides and depsidones as inhibitors of HIV-1 integrase: discovery of novel inhibitors through 3D database searching.

  Nouri Neamati;Huixiao Hong;Abhijit Mazumder;Shaomeng Wang

  318
  Citations

• Persistent Organic Pollutants in Food: Contamination Sources, Health Effects and Detection Methods

  Wenjing Guo;Bohu Pan;Sugunadevi Sakkiah;Gokhan Yavas

  302
  Citations

• ArrayTrack--supporting toxicogenomic research at the U.S. Food and Drug Administration National Center for Toxicological Research.

  Weida Tong;Xiaoxi Cao;Stephen Harris;Hongmei Sun

  291
  Citations

• Decision Forest: Combining the Predictions of Multiple Independent Decision Tree Models

  Weida Tong;Huixiao Hong;Hong Fang;Qian Xie

  288
  Citations

• Cross-platform comparability of microarray technology: intra-platform consistency and appropriate data analysis procedures are essential.

  Leming Shi;Weida Tong;Hong Fang;Uwe Scherf

  254
  Citations

• Next-generation sequencing and its applications in molecular diagnostics

  Zhenqiang Su;Baitang Ning;Hong Fang;Huixiao Hong

  243
  Citations

• HIV-1 integrase pharmacophore: discovery of inhibitors through three-dimensional database searching.

  Marc C. Nicklaus;Nouri Neamati;Huixiao Hong;Abhijit Mazumder

  218
  Citations

• An investigation of biomarkers derived from legacy microarray data for their utility in the RNA-seq era

  Zhenqiang Su;Zhenqiang Su;Hong Fang;Huixiao Hong;Leming Shi

  209
  Citations