Francesco Asnicar

Francesco Asnicar publication distribution in Microbiology in 2026

The chart shows the distribution of publications by all Research.com ranked scientists in the field of Microbiology in 2026. The highlighted bar marks where Francesco Asnicar sits on this spectrum.

Francesco Asnicar D-index placement in Microbiology in 2026

The chart shows the D-index (discipline H-index) distribution of Microbiology scientists ranked by Research.com in 2026. The highlighted bar marks where Francesco Asnicar sits on this spectrum.

Best Publications

• Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

  Evan Bolyen;Jai Ram Rideout;Matthew R. Dillon;Nicholas A. Bokulich

  21851
  Citations

• Author Correction: Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2.

  Evan Bolyen;Jai Ram Rideout;Matthew R. Dillon;Nicholas A. Bokulich

  4019
  Citations

• Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with biobakery 3

  Francesco Beghini;Lauren J McIver;Aitor Blanco-Míguez;Leonard Dubois

  2085
  Citations

• Extensive Unexplored Human Microbiome Diversity Revealed by Over 150,000 Genomes from Metagenomes Spanning Age, Geography, and Lifestyle.

  Edoardo Pasolli;Francesco Asnicar;Serena Manara;Moreno Zolfo

  1596
  Citations

• Extending and improving metagenomic taxonomic profiling with uncharacterized species using MetaPhlAn 4

  Unknown

  1322
  Citations

• Mother-to-Infant Microbial Transmission from Different Body Sites Shapes the Developing Infant Gut Microbiome.

  Pamela Ferretti;Edoardo Pasolli;Adrian Tett;Francesco Asnicar

  1273
  Citations

• QIIME 2: Reproducible, interactive, scalable, and extensible microbiome data science

  Evan Bolyen;Jai Ram Rideout;Matthew R Dillon;Nicholas A Bokulich

  992
  Citations

• Metagenomic analysis of colorectal cancer datasets identifies cross-cohort microbial diagnostic signatures and a link with choline degradation

  Andrew Maltez Thomas;Andrew Maltez Thomas;Paolo Manghi;Francesco Asnicar;Edoardo Pasolli

  985
  Citations

• Microbiome connections with host metabolism and habitual diet from 1,098 deeply phenotyped individuals.

  Francesco Asnicar;Sarah E. Berry;Ana M. Valdes;Ana M. Valdes;Long H. Nguyen

  934
  Citations

• Compact graphical representation of phylogenetic data and metadata with GraPhlAn

  Francesco Asnicar;George Weingart;Timothy L. Tickle;Curtis Huttenhower

  842
  Citations

• Precise phylogenetic analysis of microbial isolates and genomes from metagenomes using PhyloPhlAn 3.0.

  Francesco Asnicar;Andrew Maltez Thomas;Francesco Beghini;Claudia Mengoni

  816
  Citations

• Cross-cohort gut microbiome associations with immune checkpoint inhibitor response in advanced melanoma

  Unknown

  550
  Citations

• The person-to-person transmission landscape of the gut and oral microbiomes

  Unknown

  515
  Citations

• Gut vascular barrier impairment leads to intestinal bacteria dissemination and colorectal cancer metastasis to liver

  Alice Bertocchi;Sara Carloni;Paola Simona Ravenda;Giovanni Bertalot

  467
  Citations

• Endogenous murine microbiota member Faecalibaculum rodentium and its human homologue protect from intestinal tumour growth.

  Elena Zagato;Elena Zagato;Chiara Pozzi;Alice Bertocchi;Tiziana Schioppa

  466
  Citations

• Strain-Level Analysis of Mother-to-Child Bacterial Transmission during the First Few Months of Life

  Moran Yassour;Moran Yassour;Moran Yassour;Eeva Jason;Larson J. Hogstrom;Timothy D. Arthur

  458
  Citations

• The Prevotella copri Complex Comprises Four Distinct Clades Underrepresented in Westernized Populations

  Adrian Tett;Kun D. Huang;Francesco Asnicar;Hannah Fehlner-Peach

  448
  Citations

• Studying Vertical Microbiome Transmission from Mothers to Infants by Strain-Level Metagenomic Profiling

  Francesco Asnicar;Serena Manara;Moreno Zolfo;Duy Tin Truong

  415
  Citations

• Strain-level microbial epidemiology and population genomics from shotgun metagenomics

  Matthias Scholz;Doyle V Ward;Edoardo Pasolli;Thomas Tolio

  400
  Citations

• Phylogenomics of 10,575 genomes reveals evolutionary proximity between domains Bacteria and Archaea.

  Qiyun Zhu;Uyen Mai;Wayne Pfeiffer;Stefan Janssen;Stefan Janssen

  380
  Citations