Alberto Perez

Alberto Perez publication distribution in Chemistry in 2026

The chart shows the distribution of publications by all Research.com ranked scientists in the field of Chemistry in 2026. The highlighted bar marks where Alberto Perez sits on this spectrum.

Alberto Perez D-index placement in Chemistry in 2026

The chart shows the D-index (discipline H-index) distribution of Chemistry scientists ranked by Research.com in 2026. The highlighted bar marks where Alberto Perez sits on this spectrum.

Best Publications

• Refinement of the AMBER Force Field for Nucleic Acids: Improving the Description of α/γ Conformers

  Alberto Pérez;Iván Marchán;Daniel Svozil;Daniel Svozil;Jiri Sponer;Jiri Sponer

  2508
  Citations

• Parmbsc1: a refined force field for DNA simulations

  Ivan Ivani;Pablo D Dans;Agnes Noy;Alberto Pérez

  1147
  Citations

• A systematic molecular dynamics study of nearest-neighbor effects on base pair and base pair step conformations and fluctuations in B-DNA

  Richard Lavery;Krystyna Zakrzewska;David Beveridge;Thomas C. Bishop

  361
  Citations

• Dynamics of B-DNA on the microsecond time scale.

  Alberto Perez;F. Javier Luque;Modesto Orozco

  308
  Citations

• A consensus view of protein dynamics.

  Manuel Rueda;Carles Ferrer-Costa;Tim Meyer;Tim Meyer;Alberto Pérez

  292
  Citations

• Frontiers in Molecular Dynamics Simulations of DNA

  Alberto Pérez;F. Javier Luque;Modesto Orozco

  259
  Citations

• μABC: a systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA

  Marco Pasi;John H. Maddocks;David Beveridge;Thomas C. Bishop

  228
  Citations

• Theoretical methods for the simulation of nucleic acids.

  Modesto Orozco;Alberto Pérez;Agnes Noy;F. Javier Luque

  194
  Citations

• Towards a molecular dynamics consensus view of B-DNA flexibility

  Alberto Pérez;Filip Lankas;F. Javier Luque;Modesto Orozco

  191
  Citations

• Determining protein structures by combining semireliable data with atomistic physical models by Bayesian inference.

  Justin L. MacCallum;Alberto Perez;Ken A. Dill

  181
  Citations

• Determining promoter location based on DNA structure first-principles calculations.

  J Ramon Goñi;Alberto Pérez;David Torrents;Modesto Orozco

  170
  Citations

• Advances in free-energy-based simulations of protein folding and ligand binding.

  Alberto Perez;Joseph A Morrone;Carlos Simmerling;Ken A Dill

  162
  Citations

• MoDEL (Molecular Dynamics Extended Library): A Database of Atomistic Molecular Dynamics Trajectories

  Tim Meyer;Marco D'Abramo;Manuel Rueda

  162
  Citations

• Impact of Methylation on the Physical Properties of DNA

  Alberto Pérez;Chiara Lara Castellazzi;Federica Battistini;Kathryn Collinet

  159
  Citations

• The relative flexibility of B-DNA and A-RNA duplexes: database analysis

  Alberto Pérez;Agnes Noy;Filip Lankas;F. Javier Luque

  158
  Citations

• Essential Dynamics: A Tool for Efficient Trajectory Compression and Management

  Meyer T;Ferrer-Costa C;Pérez A;Rueda M

  142
  Citations

• Recent advances in the study of nucleic acid flexibility by molecular dynamics

  Modesto Orozco;Agnes Noy;Alberto Pérez

  132
  Citations

• Relative flexibility of DNA and RNA: a molecular dynamics study.

  Agnes Noy;Alberto Pérez;Filip Lankas;F. Javier Luque

  118
  Citations

• Expanding the repertoire of DNA shape features for genome-scale studies of transcription factor binding.

  Jinsen Li;Jared M Sagendorf;Tsu-Pei Chiu;Marco Pasi

  116
  Citations

• Assessment of protein structure refinement in CASP9.

  Justin L. MacCallum;Alberto Pérez;Michael J. Schnieders;Lan Hua

  114
  Citations