Toshihisa Takagi

Overview

Best Publications

• MetaGene: prokaryotic gene finding from environmental genome shotgun sequences

  Hideki Noguchi;Jungho Park;Toshihisa Takagi

  1319
  Citations

• Comparative Metagenomics Revealed Commonly Enriched Gene Sets in Human Gut Microbiomes

  Ken Kurokawa;Takehiko Itoh;Tomomi Kuwahara;Kenshiro Oshima

  1058
  Citations

• Automated extraction of information on protein–protein interactions from the biological literature

  Toshihide Ono;Haretsugu Hishigaki;Akira Tanigami;Toshihisa Takagi

  566
  Citations

• Estimating transcription factor bindability on DNA.

  Tatsuhiko Tsunoda;Toshihisa Takagi

  480
  Citations

• Assessment of prediction accuracy of protein function from protein–protein interaction data

  Haretsugu Hishigaki;Haretsugu Hishigaki;Kenta Nakai;Toshihide Ono;Akira Tanigami

  461
  Citations

• Integrative Annotation of 21,037 Human Genes Validated by Full-Length cDNA Clones

  Tadashi Imanishi;Takeshi Itoh;Yutaka Suzuki;Claire O'Donovan

  431
  Citations

• Alterations of gene expression during colorectal carcinogenesis revealed by cDNA microarrays after laser-capture microdissection of tumor tissues and normal epithelia.

  Osamu Kitahara;Yoichi Furukawa;Toshihiro Tanaka;Chikashi Kihara

  412
  Citations

• JSNP: a database of common gene variations in the Japanese population.

  Mika Hirakawa;Toshihiro Tanaka;Yoichi Hashimoto;Masako Kuroda

  336
  Citations

• BodyParts3D: 3D structure database for anatomical concepts

  Nobutaka Mitsuhashi;Kaori Fujieda;Takuro Tamura;Shoko Kawamoto

  292
  Citations

• Prediction of Sensitivity of Esophageal Tumors to Adjuvant Chemotherapy by cDNA Microarray Analysis of Gene-Expression Profiles

  Chikashi Kihara;Tatsuhiko Tsunoda;Toshihiro Tanaka;Hideaki Yamana

  287
  Citations

• A radiation hybrid map of the rat genome containing 5,255 markers.

  Takeshi K. Watanabe;Marie Therese Bihoreau;Linda C. McCarthy;Susanna L. Kiguwa

  278
  Citations

• Prediction of protein-protein interaction sites using support vector machines.

  Asako Koike;Toshihisa Takagi

  235
  Citations

• CLOCK-Controlled Polyphonic Regulation of Circadian Rhythms through Canonical and Noncanonical E-Boxes

  Hikari Yoshitane;Haruka Ozaki;Hideki Terajima;Ngoc-Hien Du

  151
  Citations

• ALICE: An Algorithm to Extract Abbreviations from MEDLINE

  Hiroko Ao;Toshihisa Takagi

  123
  Citations

• A Markov Logic Approach to Bio-Molecular Event Extraction

  Sebastian Riedel;Hong-Woo Chun;Toshihisa Takagi;Jun'ichi Tsujii

  120
  Citations

• The Genia Event and Protein Coreference tasks of the BioNLP Shared Task 2011.

  Jin-Dong Kim;Ngan L. T. Nguyen;Yue Wang;Jun'ichi Tsujii

  115
  Citations

• Automatic extraction of gene/protein biological functions from biomedical text

  Asako Koike;Yoshiki Niwa;Toshihisa Takagi

  113
  Citations

• DDBJ launches a new archive database with analytical tools for next-generation sequence data

  Eli Kaminuma;Jun Mashima;Yuichi Kodama;Takashi Gojobori

  113
  Citations

• PNAD-CSS: a workbench for constructing a protein name abbreviation dictionary.

  Mikio Yoshida;Ken-ichiro Fukuda;Toshihisa Takagi

  105
  Citations

• DNA Data Bank of Japan

  Jun Mashima;Yuichi Kodama;Takatomo Fujisawa;Toshiaki Katayama

  105
  Citations

• Gene recognition by combination of several gene-finding programs.

  Katsuhiko Murakami;Toshihisa Takagi

  102
  Citations