D-Index & Metrics Best Publications

D-Index & Metrics D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines.

Discipline name D-index D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines. Citations Publications World Ranking National Ranking
Genetics D-index 41 Citations 15,265 125 World Ranking 3646 National Ranking 166

Overview

What is he best known for?

The fields of study he is best known for:

  • Gene
  • DNA
  • Genome

Takeshi Itoh mainly investigates Genome, Genetics, Gene, Oryza sativa and Genome project. His Genome research is multidisciplinary, incorporating elements of Annotation and DNA sequencing. His study in the field of Sequence analysis, Insertion sequence, Operon and Genome evolution also crosses realms of Bacillus subtilis.

His work on Gene prediction, Escherichia coli and Gene orders is typically connected to Ribosomal protein as part of general Gene study, connecting several disciplines of science. The Oryza sativa study combines topics in areas such as Complementary DNA, Transcriptome, Botany and Microbiology. The concepts of his Gene family study are interwoven with issues in Proteome, Synteny, Transposable element and Gene expression profiling.

His most cited work include:

  • The map-based sequence of the rice genome (2891 citations)
  • The map-based sequence of the rice genome (2891 citations)
  • Improvement of the Oryza sativa Nipponbare reference genome using next generation sequence and optical map data (991 citations)

What are the main themes of his work throughout his whole career to date?

Takeshi Itoh focuses on Genome, Genetics, Gene, Oryza sativa and Computational biology. His Genome research focuses on DNA sequencing and how it connects with Deep sequencing. His study in Gene expression, Transcriptome, Gene expression profiling, Gene duplication and Transposable element is carried out as part of his studies in Gene.

His research investigates the link between Oryza sativa and topics such as Arabidopsis that cross with problems in Arabidopsis thaliana. His Computational biology research is multidisciplinary, incorporating elements of Genome editing, Genome browser, Open reading frame and DNA. His Genome project research is multidisciplinary, incorporating perspectives in Genome size and Functional genomics.

He most often published in these fields:

  • Genome (62.32%)
  • Genetics (52.90%)
  • Gene (41.30%)

What were the highlights of his more recent work (between 2014-2021)?

  • Genome (62.32%)
  • Genomics (17.39%)
  • Computational biology (20.29%)

In recent papers he was focusing on the following fields of study:

Takeshi Itoh mostly deals with Genome, Genomics, Computational biology, Gene and Genetics. His Genome research incorporates themes from High-Throughput DNA Sequencing and DNA sequencing. His Genomics study combines topics from a wide range of disciplines, such as Contig, Genetic diversity, Botany, Biotechnology and Whole genome sequencing.

The various areas that he examines in his Whole genome sequencing study include Evolutionary biology, Blat, Reference genome, Oryza sativa and Genetic variation. His Computational biology study incorporates themes from Genome editing, Vigna and Sequence assembly. He is involved in the study of Gene that focuses on Transcriptome in particular.

Between 2014 and 2021, his most popular works were:

  • Genome editing in plants by engineered CRISPR-Cas9 recognizing NG PAM. (72 citations)
  • The power of single molecule real-time sequencing technology in the de novo assembly of a eukaryotic genome. (49 citations)
  • Development of transcriptome shotgun assembly-derived markers in bunching onion (Allium fistulosum) (48 citations)

In his most recent research, the most cited papers focused on:

  • Gene
  • DNA
  • Genome

His primary areas of study are Genome, Gene, Genetics, Genomics and Whole genome sequencing. He combines subjects such as Computational biology and Cytidine deaminase with his study of Genome. Takeshi Itoh studies Gene, focusing on Oryza sativa in particular.

His Oryza sativa research includes themes of Plant hormone, Jasmonic acid, Regulation of gene expression and Abiotic stress. His work in the fields of Genomics, such as Genome browser, intersects with other areas such as Single molecule real time sequencing. His biological study spans a wide range of topics, including Blat, Vigna and Genetic diversity.

This overview was generated by a machine learning system which analysed the scientist’s body of work. If you have any feedback, you can contact us here.

Best Publications

The map-based sequence of the rice genome

Takashi Matsumoto;Jianzhong Wu;Hiroyuki Kanamori;Yuichi Katayose.
Nature (2005)

5000 Citations

Improvement of the Oryza sativa Nipponbare reference genome using next generation sequence and optical map data

Yoshihiro Kawahara;Melissa de la Bastide;John P Hamilton;Hiroyuki Kanamori.
Rice (2013)

1457 Citations

Biased biological functions of horizontally transferred genes in prokaryotic genomes.

Yoji Nakamura;Yoji Nakamura;Takeshi Itoh;Hideo Matsuda;Takashi Gojobori;Takashi Gojobori.
Nature Genetics (2004)

551 Citations

Rice Annotation Project Database (RAP-DB): an integrative and interactive database for rice genomics.

Hiroaki Sakai;Sung Shin Lee;Tsuyoshi Tanaka;Hisataka Numa.
Plant and Cell Physiology (2013)

540 Citations

Unlocking the Barley Genome by Chromosomal and Comparative Genomics

Klaus F. X. Mayer;Mihaela Martis;Pete E. Hedley;Hana Simkova.
The Plant Cell (2011)

521 Citations

Integrative Annotation of 21,037 Human Genes Validated by Full-Length cDNA Clones

Tadashi Imanishi;Takeshi Itoh;Yutaka Suzuki;Claire O'Donovan.
PLOS Biology (2004)

426 Citations

Evolutionary instability of operon structures disclosed by sequence comparisons of complete microbial genomes.

T Itoh;K Takemoto;H Mori;T Gojobori.
Molecular Biology and Evolution (1999)

306 Citations

The Rice Annotation Project Database (RAP-DB): 2008 update

Tsuyoshi Tanaka;Baltazar A. Antonio;Shoshi Kikuchi;Takashi Matsumoto.
Nucleic Acids Research (2007)

303 Citations

The Rice Annotation Project Database (RAP-DB): hub for Oryza sativa ssp. japonica genome information

Hajime Ohyanagi;Tsuyoshi Tanaka;Hiroaki Sakai;Yasumasa Shigemoto.
Nucleic Acids Research (2006)

279 Citations

Simultaneous RNA-seq analysis of a mixed transcriptome of rice and blast fungus interaction.

Yoshihiro Kawahara;Youko Oono;Hiroyuki Kanamori;Takashi Matsumoto.
PLOS ONE (2012)

245 Citations

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