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Genetics

D-Index
48
Citations
12780
World Ranking
4038
National Ranking
178

Overview

Takashi Matsumoto is affiliated with Tokyo University of Agriculture in Japan and has a research profile spanning materials science and related disciplines. Their main field of study includes Materials Science, with a particular focus on subfields such as Materials Chemistry and Plant Science. Additional areas of interest encompass Molecular Biology, Spectroscopy, and Biomedical Engineering.

The primary topics covered in their body of work include:

  • Crystallization and Solubility Studies
  • X-ray Diffraction in Crystallography
  • Crystallography and molecular interactions
  • Plant Gene Expression Analysis
  • Synthesis and Properties of Aromatic Compounds
  • Axial and Atropisomeric Chirality Synthesis
  • Advanced NMR Techniques and Applications

Matsumoto has contributed to several recent publications that reflect their scientific interests and collaborations. Some key papers include:

  • "What is This?" A Structure Analysis Tool for Rapid and Automated Solution of Small Molecule Structures, 2020, Journal of Chemical Crystallography
  • Rhodium-Catalyzed Highly Diastereo- and Enantioselective Synthesis of a Configurationally Stable S-Shaped Double Helicene-Like Molecule, 2020, Angewandte Chemie International Edition
  • Evolutionary dynamics and impacts of chromosome regions carrying R-gene clusters in rice, 2020, Scientific Reports
  • SNORKEL Genes Relating to Flood Tolerance Were Pseudogenized in Normal Cultivated Rice, 2022, Plants

The publication venues where Matsumoto frequently appears include:

  • The Cambridge Structural Database
  • Angewandte Chemie International Edition
  • Angewandte Chemie
  • Frontiers in Plant Science
  • Plant Biotechnology

Collaboration plays a significant role in their research output. Frequent coauthors associated with Matsumoto include:

  • Kazunori Miyamoto
  • Masanobu Uchiyama
  • Jian Wu
  • Akihito Yamano
  • Tadafumi Matsunaga

Best Publications

  • Improvement of the Oryza sativa Nipponbare reference genome using next generation sequence and optical map data

    Yoshihiro Kawahara;Melissa de la Bastide;John P Hamilton;Hiroyuki Kanamori

  • The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep water.

    Yoko Hattori;Keisuke Nagai;Shizuka Furukawa;Xian Jun Song

  • Rice Annotation Project Database (RAP-DB): an integrative and interactive database for rice genomics.

    Hiroaki Sakai;Sung Shin Lee;Tsuyoshi Tanaka;Hisataka Numa

  • Unlocking the Barley Genome by Chromosomal and Comparative Genomics

    Klaus F. X. Mayer;Mihaela Martis;Pete E. Hedley;Hana Simkova

  • Two adjacent nucleotide-binding site-leucine-rich repeat class genes are required to confer Pikm-specific rice blast resistance.

    Ikuo Ashikawa;Nagao Hayashi;Hiroko Yamane;Hiroyuki Kanamori

  • Barley grain with adhering hulls is controlled by an ERF family transcription factor gene regulating a lipid biosynthesis pathway.

    Shin Taketa;Satoko Amano;Yasuhiro Tsujino;Tomohiko Sato

  • Evolutionary history of GS3, a gene conferring grain length in rice

    Noriko Takano-Kai;Hui R Jiang;Takahiko Kubo;Megan Sweeney

  • Durable panicle blast-resistance gene Pb1 encodes an atypical CC-NBS-LRR protein and was generated by acquiring a promoter through local genome duplication.

    Nagao Hayashi;Haruhiko Inoue;Takahiro Kato;Taketo Funao

  • Evolution of the Grain Dispersal System in Barley

    Mohammad Pourkheirandish;Goetz Hensel;Benjamin Kilian;Natesan Senthil

  • Simultaneous RNA-seq analysis of a mixed transcriptome of rice and blast fungus interaction.

    Yoshihiro Kawahara;Youko Oono;Hiroyuki Kanamori;Takashi Matsumoto

  • Cleistogamous flowering in barley arises from the suppression of microRNA-guided HvAP2 mRNA cleavage

    Sudha K. Nair;Ning Wang;Yerlan Turuspekov;Yerlan Turuspekov;Mohammad Pourkheirandish

  • RiceGAAS: an automated annotation system and database for rice genome sequence

    Katsumi Sakata;Yoshiaki Nagamura;Hisataka Numa;Baltazar A. Antonio

  • Mitochondrial gene in the nuclear genome induces reproductive barrier in rice

    Yoshiyuki Yamagata;Eiji Yamamoto;Kohichiro Aya;Khin Thanda Win

  • Crystal structure of a catalytic-site mutant alpha-amylase from Bacillus subtilis complexed with maltopentaose.

    Zui Fujimoto;Kenji Takase;Nobuko Doui;Mitsuru Momma

  • Molecular spectrum of somaclonal variation in regenerated rice revealed by whole-genome sequencing.

    Akio Miyao;Mariko Nakagome;Takako Ohnuma;Harumi Yamagata

  • Characterisation of the wheat ( triticum aestivum L . ) transcriptome by de novo assembly for the discovery of phosphate starvation-responsive genes: gene expression in Pi-stressed wheat

    Youko Oono;Fuminori Kobayashi;Yoshihiro Kawahara;Takayuki Yazawa

  • Comparative sequence analyses of the major quantitative trait locus phosphorus uptake 1 (Pup1) reveal a complex genetic structure.

    Sigrid Heuer;Xiaochun Lu;Joong Hyoun Chin;Juan Pariasca Tanaka

  • The rice retrotransposon Tos17 prefers low-copy-number sequences as integration targets

    M Yamazaki;H Tsugawa;A Miyao;M Yano

  • Development of Genome-wide Simple Sequence Repeat Markers Using Whole-genome Shotgun Sequences of Sorghum (Sorghum bicolor (L.) Moench)

    Jun-ichi Yonemaru;Tsuyu Ando;Tatsumi Mizubayashi;Shigemitsu Kasuga

  • A short internodes (SHI) family transcription factor gene regulates awn elongation and pistil morphology in barley

    Takahisa Yuo;Yuko Yamashita;Hiroyuki Kanamori;Takashi Matsumoto

Frequent Co-Authors

Hiroyuki Kanamori
Hiroyuki Kanamori Kyoto Prefectural University
Takuji Sasaki
Takuji Sasaki Tokyo University of Agriculture
Takeshi Itoh
Takeshi Itoh Nara Institute of Science and Technology
Yoshihiro Kawahara
Yoshihiro Kawahara University of Tokyo
Yoshiaki Nagamura
Yoshiaki Nagamura National Institute of Agrobiological Sciences
Takao Komatsuda
Takao Komatsuda National Agriculture and Food Research Organization
Kazuhiro Sato
Kazuhiro Sato Okayama University
Masahiro Yano
Masahiro Yano National Agriculture and Food Research Organization
Thomas Wicker
Thomas Wicker University of Zurich
Nils Stein
Nils Stein University of Western Australia

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