Ana Conesa

Overview

Best Publications

• Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

  Ana Conesa;Stefan Götz;Juan Miguel García-Gómez;Javier Terol

  12452
  Citations

• High-throughput functional annotation and data mining with the Blast2GO suite.

  Stefan Götz;Juan Miguel García-Gómez;Javier Terol;Tim D. Williams

  4568
  Citations

• A survey of best practices for RNA-seq data analysis

  Ana Conesa;Pedro Madrigal;Pedro Madrigal;Sonia Tarazona;David Gomez-Cabrero

  2774
  Citations

• Blast2GO: A comprehensive suite for functional analysis in plant genomics.

  Ana Conesa;Stefan Götz

  2271
  Citations

• Qualimap 2: advanced multi-sample quality control for high-throughput sequencing data

  Konstantin Okonechnikov;Ana Conesa;Fernando García-Alcalde

  1703
  Citations

• Differential expression in RNA-seq: A matter of depth

  Sonia Tarazona;Fernando García-Alcalde;Joaquín Dopazo;Alberto Ferrer

  1651
  Citations

• Qualimap: evaluating next generation sequencing alignment data

  Fernando García-Alcalde;Konstantin Okonechnikov;José Carbonell;Luis M. Cruz

  1236
  Citations

• A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium

  Zhenqiang Su;Paweł P. Łabaj;Sheng Li;Jean Thierry-Mieg

  1015
  Citations

• Data quality aware analysis of differential expression in RNA-seq with NOISeq R/Bioc package

  Sonia Tarazona;Pedro Furió-Tarí;David Turrà;Antonio Di Pietro

  829
  Citations

• Filamentous fungi as cell factories for heterologous protein production

  Peter J Punt;Nick van Biezen;Ana Conesa;Alwin Albers

  591
  Citations

• maSigPro: a method to identify significantly differential expression profiles in time-course microarray experiments

  Ana Conesa;María José Nueda;Alberto Ferrer;Manuel Talón

  541
  Citations

• SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification.

  Manuel Tardaguila;Lorena de la Fuente;Cristina Marti;Cécile Pereira

  517
  Citations

• Data integration in the era of omics: current and future challenges.

  David Gomez-Cabrero;Imad Abugessaisa;Dieter Maier;Andrew E. Teschendorff

  491
  Citations

• Initial genomics of the human nucleolus.

  Attila Németh;Ana Conesa;Javier Santoyo-Lopez;Ignacio Medina

  431
  Citations

• Babelomics: an integrative platform for the analysis of transcriptomics, proteomics and genomic data with advanced functional profiling

  Ignacio Medina;José Carbonell;Luis Pulido;Sara C. Madeira

  380
  Citations

• The secretion pathway in filamentous fungi: a biotechnological view

  A. Conesa;P.J. Punt;N. van Luijk;C.A.M.J.J. van den Hondel

  340
  Citations

• Next maSigPro: updating maSigPro bioconductor package for RNA-seq time series.

  María José Nueda;Sonia Tarazona;Ana Conesa

  316
  Citations

• Making sense of big data in health research: Towards an EU action plan

  Charles Auffray;Charles Auffray;Rudi Balling;Inês Barroso;László Bencze

  299
  Citations

• Overexpression of the vascular brassinosteroid receptor BRL3 confers drought resistance without penalizing plant growth

  Norma Fàbregas;Fidel Lozano-Elena;David Blasco-Escámez;Takayuki Tohge

  289
  Citations

• Fungal peroxidases: molecular aspects and applications.

  Ana Conesa;Peter J. Punt;Cees A.M.J.J. van den Hondel

  264
  Citations