D-Index & Metrics Best Publications

D-Index & Metrics D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines.

Discipline name D-index D-index (Discipline H-index) only includes papers and citation values for an examined discipline in contrast to General H-index which accounts for publications across all disciplines. Citations Publications World Ranking National Ranking
Biology and Biochemistry D-index 53 Citations 31,023 167 World Ranking 11332 National Ranking 4874

Overview

What is she best known for?

The fields of study she is best known for:

  • Gene
  • DNA
  • Genetics

Computational biology, Gene expression profiling, Genomics, Genetics and RNA-Seq are her primary areas of study. Her work in Computational biology addresses subjects such as KEGG, which are connected to disciplines such as TRANSFAC, Cluster analysis and Proteomics. Her Gene expression profiling research incorporates elements of Deep sequencing, Microarray, DNA microarray, Feature selection and Time course.

Her studies in Genomics integrate themes in fields like Annotation, Visualization and Blast2GO. The Visualization study combines topics in areas such as UniGene and Sequence analysis. Her Blast2GO research is multidisciplinary, incorporating perspectives in Computer graphics, De novo transcriptome assembly, World Wide Web, Directed acyclic graph and InterProScan.

Her most cited work include:

  • Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research (8042 citations)
  • High-throughput functional annotation and data mining with the Blast2GO suite. (2551 citations)
  • Blast2GO: A comprehensive suite for functional analysis in plant genomics. (1471 citations)

What are the main themes of her work throughout her whole career to date?

Ana Conesa mainly investigates Computational biology, Gene, Genetics, Gene expression and Transcriptome. Her work deals with themes such as RNA-Seq, Gene expression profiling, Alternative splicing, Gene isoform and Genomics, which intersect with Computational biology. Her primary area of study in Genomics is in the field of Functional genomics.

Ana Conesa has included themes like Annotation and Visualization in her Functional genomics study. Her Visualization study integrates concerns from other disciplines, such as Data science and Blast2GO. Ana Conesa interconnects Data mining, Function and Virology in the investigation of issues within Gene.

She most often published in these fields:

  • Computational biology (25.14%)
  • Gene (25.14%)
  • Genetics (18.29%)

What were the highlights of her more recent work (between 2018-2021)?

  • Computational biology (25.14%)
  • Gene (25.14%)
  • Gene expression (17.71%)

In recent papers she was focusing on the following fields of study:

Ana Conesa spends much of her time researching Computational biology, Gene, Gene expression, Multi omics and Gene isoform. Her Computational biology study combines topics from a wide range of disciplines, such as RNA-Seq, Annotation, Metabolomics, Genomics and Chromatin. Her studies deal with areas such as Identification and Gene expression profiling as well as RNA-Seq.

Her Annotation research is multidisciplinary, incorporating elements of Human genetics and Identification. Her Genomics study incorporates themes from Information retrieval, Knowledge extraction and Molecular pathway. Her Regulation of gene expression study integrates concerns from other disciplines, such as Genome and Cellular differentiation.

Between 2018 and 2021, her most popular works were:

  • Making multi-omics data accessible to researchers. (26 citations)
  • Harmonization of quality metrics and power calculation in multi-omic studies. (20 citations)
  • Building gene regulatory networks from scATAC-seq and scRNA-seq using Linked Self Organizing Maps. (18 citations)

In her most recent research, the most cited papers focused on:

  • Gene
  • DNA
  • Genome

Her primary areas of study are Computational biology, Cellular differentiation, Data integration, RNA splicing and Data type. The various areas that she examines in her Computational biology study include RNA-Seq and Alternative splicing. Her RNA-Seq research incorporates themes from Proteomics, Identification, Metabolomics and Genomics.

Ana Conesa works mostly in the field of Cellular differentiation, limiting it down to topics relating to Regulation of gene expression and, in certain cases, Progenitor cell, Transcription factor, Developmental biology, Housekeeping gene and Cell biology. The subject of her Data integration research is within the realm of Data mining. Her studies in RNA splicing integrate themes in fields like Annotation, Human genetics and Identification.

This overview was generated by a machine learning system which analysed the scientist’s body of work. If you have any feedback, you can contact us here.

Best Publications

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

Ana Conesa;Stefan Götz;Juan Miguel García-Gómez;Javier Terol.
Bioinformatics (2005)

10687 Citations

High-throughput functional annotation and data mining with the Blast2GO suite.

Stefan Götz;Juan Miguel García-Gómez;Javier Terol;Tim D. Williams.
Nucleic Acids Research (2008)

3561 Citations

A survey of best practices for RNA-seq data analysis

Ana Conesa;Pedro Madrigal;Pedro Madrigal;Sonia Tarazona;David Gomez-Cabrero.
Genome Biology (2016)

2109 Citations

Blast2GO: A comprehensive suite for functional analysis in plant genomics.

Ana Conesa;Stefan Götz.
International Journal of Plant Genomics (2008)

1802 Citations

Differential expression in RNA-seq: A matter of depth

Sonia Tarazona;Fernando García-Alcalde;Joaquín Dopazo;Alberto Ferrer.
Genome Research (2011)

1459 Citations

A comprehensive assessment of RNA-seq accuracy, reproducibility and information content by the Sequencing Quality Control Consortium

Zhenqiang Su;Paweł P. Łabaj;Sheng Li;Jean Thierry-Mieg.
Nature Biotechnology (2014)

755 Citations

Qualimap: evaluating next generation sequencing alignment data

Fernando García-Alcalde;Konstantin Okonechnikov;José Carbonell;Luis M. Cruz.
Bioinformatics (2012)

692 Citations

Qualimap 2: advanced multi-sample quality control for high-throughput sequencing data

Konstantin Okonechnikov;Ana Conesa;Fernando García-Alcalde.
Bioinformatics (2015)

663 Citations

Filamentous fungi as cell factories for heterologous protein production

Peter J Punt;Nick van Biezen;Ana Conesa;Alwin Albers.
Trends in Biotechnology (2002)

566 Citations

Data quality aware analysis of differential expression in RNA-seq with NOISeq R/Bioc package

Sonia Tarazona;Pedro Furió-Tarí;David Turrà;Antonio Di Pietro.
Nucleic Acids Research (2015)

496 Citations

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