Yvan Saeys

Overview

Best Publications

• A review of feature selection techniques in bioinformatics

  Yvan Saeys;Iñaki Inza;Pedro Larrañaga

  6212
  Citations

• FlowSOM: Using self-organizing maps for visualization and interpretation of cytometry data.

  Sofie Van Gassen;Sofie Van Gassen;Britt Callebaut;Mary J. Van Helden;Bart N. Lambrecht

  1962
  Citations

• A comparison of single-cell trajectory inference methods.

  Wouter Saelens;Robrecht Cannoodt;Robrecht Cannoodt;Helena Todorov;Helena Todorov;Yvan Saeys

  1308
  Citations

• NicheNet: modeling intercellular communication by linking ligands to target genes

  Robin Browaeys;Wouter Saelens;Yvan Saeys

  1267
  Citations

• A single-cell atlas of mouse brain macrophages reveals unique transcriptional identities shaped by ontogeny and tissue environment.

  Hannah Van Hove;Liesbet Martens;Isabelle Scheyltjens;Karen De Vlaminck

  1035
  Citations

• Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features

  Evelyne Derelle;Conchita Ferraz;Stephane Rombauts;Pierre Rouzé

  980
  Citations

• Guidelines for the use of flow cytometry and cell sorting in immunological studies (second edition)

  Andrea Cossarizza;Hyun Dong Chang;Andreas Radbruch;Andreas Acs

  914
  Citations

• Bone marrow-derived monocytes give rise to self-renewing and fully differentiated Kupffer cells

  Charlotte L Scott;Fang Zheng;Fang Zheng;Patrick De Baetselier;Liesbet Martens

  884
  Citations

• Unsupervised High-Dimensional Analysis Aligns Dendritic Cells across Tissues and Species.

  Martin Guilliams;Martin Guilliams;Charles-Antoine Dutertre;Charles-Antoine Dutertre;Charlotte L. Scott;Naomi McGovern

  851
  Citations

• A scalable SCENIC workflow for single-cell gene regulatory network analysis.

  Bram Van de Sande;Christopher Flerin;Kristofer Davie;Maxime De Waegeneer

  840
  Citations

• A cell atlas of human thymic development defines T cell repertoire formation.

  Jong-Eun Park;Rachel A. Botting;Cecilia Domínguez Conde;Dorin-Mirel Popescu

  824
  Citations

• The function of Fcγ receptors in dendritic cells and macrophages

  Martin Guilliams;Pierre Bruhns;Yvan Saeys;Hamida Hammad

  758
  Citations

• Robust biomarker identification for cancer diagnosis with ensemble feature selection methods

  Thomas Abeel;Thibault Helleputte;Yves Van de Peer;Pierre Dupont

  724
  Citations

• Yolk Sac Macrophages, Fetal Liver, and Adult Monocytes Can Colonize an Empty Niche and Develop into Functional Tissue-Resident Macrophages

  Lianne van de Laar;Wouter Saelens;Sofie De Prijck;Liesbet Martens

  661
  Citations

• Single-cell profiling of myeloid cells in glioblastoma across species and disease stage reveals macrophage competition and specialization.

  Ana Rita Pombo Antunes;Isabelle Scheyltjens;Francesca Lodi;Julie Messiaen

  624
  Citations

• Stellate Cells, Hepatocytes, and Endothelial Cells Imprint the Kupffer Cell Identity on Monocytes Colonizing the Liver Macrophage Niche

  Johnny Bonnardel;Wouter T’Jonck;Djoere Gaublomme;Robin Browaeys

  569
  Citations

• Trajectory-based differential expression analysis for single-cell sequencing data.

  Koen Van den Berge;Koen Van den Berge;Hector Roux de Bézieux;Kelly Street;Wouter Saelens

  504
  Citations

• Computational flow cytometry: helping to make sense of high-dimensional immunology data

  Yvan Saeys;Sofie Van Gassen;Bart N. Lambrecht;Bart N. Lambrecht

  471
  Citations

• Osteopontin Expression Identifies a Subset of Recruited Macrophages Distinct from Kupffer Cells in the Fatty Liver

  Anneleen Remmerie;Liesbet Martens;Tinne Thoné;Angela Castoldi

  379
  Citations

• Robust biomarker identification for cancer diagnosis using ensemble feature selection methods

  Thomas Abeel;Thibault Helleputte;Yves Van de Peer;Pierre Dupont

  3
  Citations