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Karine Labadie

Karine Labadie

D-Index & Metrics

Genetics

D-Index
55
Citations
25317
World Ranking
3535
National Ranking
179

Overview

Karine Labadie is affiliated with Genoscope in France and has a significant body of work in the fields of Agricultural and Biological Sciences, Environmental Science, and Biochemistry, Genetics and Molecular Biology. Their research spans several subfields including Molecular Biology, Plant Science, Ecology, Oceanography, and Insect Science.

The scientist's publications focus on topics such as Genomics and Phylogenetic Studies, Microbial Community Ecology and Physiology, Protist diversity and phylogeny, Chromosomal and Genetic Variations, Plant Virus Research Studies, Coral and Marine Ecosystems Studies, and Environmental DNA in Biodiversity Studies.

Frequent publication venues for Karine Labadie include:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Open Research Europe
  • Zenodo (CERN European Organization for Nuclear Research)
  • Nature Communications
  • Communications Biology

Several coauthors regularly collaborate with this researcher, notably:

  • Jean-Marc Aury
  • Patrick Wincker
  • Corinne Cruaud
  • Benjamin Noël
  • Caroline Belser

Key recent publications include:

  • "Cryptic and abundant marine viruses at the evolutionary origins of Earth's RNA virome," 2022, Science
  • "Telomere-to-telomere gapless chromosomes of banana using nanopore sequencing," 2021, Communications Biology
  • "Functional repertoire convergence of distantly related eukaryotic plankton lineages abundant in the sunlit ocean," 2022, Cell Genomics
  • "Biogeography of marine giant viruses reveals their interplay with eukaryotes and ecological functions," 2020, Nature Ecology & Evolution
  • "Compendium of 530 metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean," 2021, Nature Microbiology

Best Publications

  • Structure and function of the global ocean microbiome

    Shinichi Sunagawa;Luis Pedro Coelho;Samuel Chaffron;Jens Roat Kultima

  • Shifting the limits in wheat research and breeding using a fully annotated reference genome

    Rudi Appels;Rudi Appels;Kellye Eversole;Nils Stein;Nils Stein

  • Early allopolyploid evolution in the post-Neolithic Brassica napus oilseed genome

    Boulos Chalhoub;Shengyi Liu;Isobel A.P. Parkin

  • The banana (Musa acuminata) genome and the evolution of monocotyledonous plants

    Angélique D'hont;Jean Marc Aury;Franc Christophe Baurens

  • Genome evolution across 1,011 Saccharomyces cerevisiae isolates

    Jackson Peter;Matteo De Chiara;Anne Friedrich;Jia-Xing Yue

  • The rainbow trout genome provides novel insights into evolution after whole-genome duplication in vertebrates

    Camille Berthelot;Frédéric Brunet;Domitille Chalopin;Amélie Juanchich

  • Sequencing of diverse mandarin, pummelo and orange genomes reveals complex history of admixture during citrus domestication

    G Albert Wu;Simon Prochnik;Jerry Jenkins;Jerome Salse

  • The coffee genome provides insight into the convergent evolution of caffeine biosynthesis

    Lorenzo Carretero-Paulet;Alexis Dereeper;Gaëtan Droc

  • Chikungunya disease in nonhuman primates involves long-term viral persistence in macrophages

    Karine Labadie;Thibaut Larcher;Christophe Joubert;Abdelkrim Mannioui

  • Thirty-thousand-year-old distant relative of giant icosahedral DNA viruses with a pandoravirus morphology

    Matthieu Legendre;Julia Bartoli;Lyubov Shmakova;Sandra Jeudy

  • Mapping the Epigenetic Basis of Complex Traits

    Sandra Cortijo;René Wardenaar;Maria Colomé-Tatché;Arthur Gilly

  • A reference genome for pea provides insight into legume genome evolution

    Jonathan Kreplak;Mohammed Amin Madoui;Petr Cápal;Petr Novák

  • The Rosa genome provides new insights into the domestication of modern roses.

    Olivier Raymond;Jérôme Gouzy;Jérémy Just;Hélène Badouin;Hélène Badouin

  • Genomic evidence for ameiotic evolution in the bdelloid rotifer Adineta vaga

    Jean François Flot;Boris Hespeels;Xiang Li;Benjamin Noel

  • Oak genome reveals facets of long lifespan.

    Christophe Plomion;Jean-Marc Aury;Joëlle Amselem;Thibault Leroy

  • Global Trends in Marine Plankton Diversity across Kingdoms of Life.

    Federico M. Ibarbalz;Nicolas Henry;Manoela C. Brandão;Séverine Martini

  • Gene Expression Changes and Community Turnover Differentially Shape the Global Ocean Metatranscriptome

    Guillem Salazar;Lucas Paoli;Adriana Alberti;Jaime Huerta-Cepas

  • Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida.

    Jonas Collén;Betina Porcel;Betina Porcel;Wilfrid Carré;Steven G Ball

  • A global ocean atlas of eukaryotic genes

    Quentin Carradec;Eric Pelletier;Corinne Da Silva;Adriana Alberti

  • Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges

    Anaïs Gouin;Anthony Bretaudeau;Anthony Bretaudeau;Kiwoong Nam;Sylvie Gimenez

Frequent Co-Authors

Patrick Wincker
Patrick Wincker University of Paris-Saclay
Jean-Marc Aury
Jean-Marc Aury University of Paris-Saclay
Corinne Da Silva
Corinne Da Silva University of Paris-Saclay
Julie Poulain
Julie Poulain French Alternative Energies and Atomic Energy Commission (CEA)
Olivier Jaillon
Olivier Jaillon University of Paris-Saclay
Chris Bowler
Chris Bowler École Normale Supérieure
Eric Karsenti
Eric Karsenti École Normale Supérieure
Shinichi Sunagawa
Shinichi Sunagawa Swiss Institute of Bioinformatics
Christophe Plomion
Christophe Plomion University of Bordeaux
Jean Weissenbach
Jean Weissenbach Centre national de la recherche scientifique, CNRS

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