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Biology and Biochemistry

D-Index
54
Citations
7782
World Ranking
15850
National Ranking
6583

Overview

James E. Seeb is affiliated with the University of Washington in the United States. Their research work spans several interconnected fields, primarily within Biochemistry, Genetics and Molecular Biology, and Environmental Science. Within these domains, their work significantly covers Genetics, Nature and Landscape Conservation, and Molecular Biology as subfields.

The scientist's research focuses on a range of topics including genetic diversity and population structure, fish ecology and management studies, genetic and phenotypic traits in livestock, genomics and phylogenetic studies, genetic mapping and diversity in plants and animals, aquaculture disease management and microbiota, and environmental DNA in biodiversity studies.

Recent papers authored or co-authored by James E. Seeb include the following:

  • Network Analysis of Linkage Disequilibrium Reveals Genome Architecture in Chum Salmon, 2020, published in G3 Genes Genomes Genetics
  • The pink salmon genome: Uncovering the genomic consequences of a two-year life cycle, 2021, published in PLoS ONE
  • Y-chromosome haplotypes are associated with variation in size and age at maturity in male Chinook salmon, 2020, published in Evolutionary Applications
  • A New Genotyping-in-Thousands-by-Sequencing Single Nucleotide Polymorphism Panel for Mixed-Stock Analysis of Chum Salmon from Coastal Western Alaska, 2022, published in North American Journal of Fisheries Management
  • Mixed-stock analyses of migratory, non-native Chinook salmon at sea and assignment to natal sites in fresh water at their introduced range in South America, 2020, published in Biological Invasions

James E. Seeb has collaborated frequently with several researchers, including Lisa W. Seeb, Garrett J. McKinney, Carita E. Pascal, Megan V. McPhee, and Kris A. Christensen. These collaborations highlight a network of scientific cooperation around fisheries genetics and related ecological research.

The scientist's publications appear in various reputable venues related to genetics, fisheries management, and environmental studies. Some of the more frequent publication venues include:

  • G3 Genes Genomes Genetics
  • PLoS ONE
  • Evolutionary Applications
  • North American Journal of Fisheries Management
  • Biological Invasions

Best Publications

  • Single-nucleotide polymorphism (SNP) discovery and applications of SNP genotyping in nonmodel organisms.

    J. E. Seeb;G. Carvalho;L. Hauser;K. Naish

  • Characterization of seven microsatellite loci derived from pink salmon.

    J. B. Olsen;Paul Bentzen;JE Seeb

  • An empirical comparison of SNPs and microsatellites for parentage and kinship assignment in a wild sockeye salmon (Oncorhynchus nerka) population.

    Lorenz Hauser;Melissa Baird;Ray Hilborn;Lisa W. Seeb

  • Characterization of 14 tetranucleotide microsatellite loci derived from sockeye salmon

    Jeffrey B. Olsen;Sheri L. Wilson;Eric J. Kretschmer;Kenneth C. Jones

  • Genotyping by sequencing resolves shallow population structure to inform conservation of Chinook salmon (Oncorhynchus tshawytscha)

    Wesley A. Larson;Lisa W. Seeb;Meredith V. Everett;Ryan K. Waples

  • Paralogs are revealed by proportion of heterozygotes and deviations in read ratios in genotyping-by-sequencing data from natural populations.

    Garrett J. McKinney;Ryan K. Waples;Lisa W. Seeb;James E. Seeb

  • Use of sequence data from rainbow trout and Atlantic salmon for SNP detection in Pacific salmon

    Christian T. Smith;Carita M. Elfstrom;Lisa W. Seeb;James E. Seeb

  • Gene-centromere mapping of 25 loci in rainbow trout

    Fred W. Allendorf;James E. Seeb;Kathy L. Knudsen;Gary H. Thorgaard

  • Advances in molecular technology and their impact on fisheries genetics

    Lorenz Hauser;James E Seeb

  • RADseq provides unprecedented insights into molecular ecology and evolutionary genetics: comment on Breaking RAD by Lowry et al. (2016).

    Garrett J. McKinney;Wesley A. Larson;Lisa W. Seeb;James E. Seeb

  • Evidence of Damage to Pink Salmon Populations Inhabiting Prince William Sound, Alaska, Two Generations after the Exxon Valdez Oil Spill

    Brian G. Bue;Samuel Sharr;James E. Seeb

  • Single Nucleotide Polymorphisms Provide Rapid and Accurate Estimates of the Proportions of U.S. and Canadian Chinook Salmon Caught in Yukon River Fisheries

    Christian T. Smith;William D. Templin;James E. Seeb;Lisa W. Seeb

  • Migration of Pacific Rim chum salmon on the high seas: insights from genetic data

    Lisa W. Seeb;Penelope A. Crane;Penelope A. Crane;Christine M. Kondzela;Richard L. Wilmot

  • Climate Change, Ecosystem Impacts, and Management for Pacific Salmon

    Daniel E. Schindler;Xan Augerot;Erica Fleishman;Nathan J. Mantua

  • SNP genotyping by the 5'-nuclease reaction: advances in high-throughput genotyping with nonmodel organisms.

    James E. Seeb;Carita E. Pascal;Ramesh Ramakrishnan;Lisa W. Seeb

  • Single nucleotide polymorphisms across a species' range: implications for conservation studies of Pacific salmon.

    L. W. Seeb;L. W. Seeb;W. D. Templin;S. Sato;S. Abe

  • Genetic structuring among Alaskan Pacific herring populations identified using microsatellite variation

    M. O'Connell;M. C. Dillon;Jonathan M. Wright;P. Bentzen

  • Summer–Fall Distribution of Stocks of Immature Sockeye Salmon in the Bering Sea as Revealed by Single-Nucleotide Polymorphisms

    C. Habicht;L. W. Seeb;K. W. Myers;E. V. Farley

  • Thirty-two single nucleotide polymorphism markers for high-throughput genotyping of sockeye salmon

    Carita M. Elfstrom;Christian T. Smith;James E. Seeb

  • Better Growth in All-Female Diploid and Triploid Rainbow Trout

    Robert J. Sheehan;Scott P. Shasteen;Arul V. Suresh;Anne R. Kapuscinski

Frequent Co-Authors

Lisa W. Seeb
Lisa W. Seeb University of Washington
Daniel E. Schindler
Daniel E. Schindler University of Washington
Fred W. Allendorf
Fred W. Allendorf University of Montana
Lorenz Hauser
Lorenz Hauser University of Washington
Gary H. Thorgaard
Gary H. Thorgaard Washington State University
Paul Bentzen
Paul Bentzen Dalhousie University
Thomas P. Quinn
Thomas P. Quinn University of Washington
Ray Hilborn
Ray Hilborn University of Washington
Trevor A. Branch
Trevor A. Branch University of Washington
Patrick M. Gaffney
Patrick M. Gaffney Oklahoma Medical Research Foundation

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