Ernst Dieter Gilles

Overview

Best Publications

• The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models.

  M. Hucka;A. Finney;H. M. Sauro;H. Bolouri;H. Bolouri

  3890
  Citations

• Metabolic network structure determines key aspects of functionality and regulation

  Jörg Stelling;Steffen Klamt;Katja Bettenbrock;Stefan Schuster

  1007
  Citations

• A methodology for the structural and functional analysis of signaling and regulatory networks

  Steffen Klamt;Julio Saez-Rodriguez;Jonathan A. Lindquist;Luca Simeoni

  501
  Citations

• A Logical Model Provides Insights into T Cell Receptor Signaling

  Julio Saez-Rodriguez;Luca Simeoni;Jonathan A. Lindquist;Rebecca Hemenway

  423
  Citations

• Bistability Analyses of a Caspase Activation Model for Receptor-induced Apoptosis

  Thomas Eissing;Holger Conzelmann;Ernst Dieter Gilles;Ernst Dieter Gilles;Frank Allgöwer

  398
  Citations

• Minimal cut sets in biochemical reaction networks

  Steffen Klamt;Ernst Dieter Gilles

  360
  Citations

• Robustness properties of circadian clock architectures.

  Jörg Stelling;Ernst Dieter Gilles;Francis J. Doyle

  324
  Citations

• FluxAnalyzer: exploring structure, pathways, and flux distributions in metabolic networks on interactive flux maps.

  Steffen Klamt;Jörg Stelling;Martin Ginkel;Ernst Dieter Gilles

  294
  Citations

• Dynamics of the direct methanol fuel cell (DMFC): experiments and model-based analysis

  Kai Sundmacher;Kai Sundmacher;Thorsten Schultz;S. Zhou;K. Scott

  292
  Citations

• Thermodynamically feasible kinetic models of reaction networks

  Michael Ederer;Ernst Dieter Gilles

  177
  Citations

• A Benchmark for Methods in Reverse Engineering and Model Discrimination: Problem Formulation and Solutions

  Andreas Kremling;Sophia Fischer;Kapil Gadkar;Francis J Doyle

  159
  Citations

• Calculability analysis in underdetermined metabolic networks illustrated by a model of the central metabolism in purple nonsulfur bacteria

  Steffen Klamt;Stefan Schuster;Ernst Dieter Gilles

  158
  Citations

• Steady-state multiplicities in reactive distillation columns for the production of fuel ethers MTBE and TAME: theoretical analysis and experimental verification

  Klaus-Dieter Mohl;Achim Kienle;Ernst-Dieter Gilles;Patrick Rapmund

  155
  Citations

• Nonlinear computation in DIVA — methods and applications

  M. Mangold;A. Kienle;E.D. Gilles;E.D. Gilles;K.D. Mohl

  146
  Citations

• A general criterion to define runaway limits in chemical reactors

  J.M. Zaldívar;J. Cano;M.A. Alós;J. Sempere

  140
  Citations

• Automatic control of the simulated moving bed process for C8 aromatics separation using asymptotically exact input/output-linearization

  E. Kloppenburg;Ernst Dieter Gilles

  131
  Citations

• A domain-oriented approach to the reduction of combinatorial complexity in signal transduction networks.

  Holger Conzelmann;Julio Saez-Rodriguez;Thomas Sauter;Boris N. Kholodenko

  130
  Citations

• Comparison of numerical methods for the simulation of dispersed phase systems

  S. Motz;A. Mitrović;E.-D. Gilles

  123
  Citations

• PROMOT: modular modeling for systems biology

  Sebastian Mirschel;Katrin Steinmetz;Michael Rempel;Martin Ginkel

  122
  Citations

• Dissecting the puzzle of life: modularization of signal transduction networks

  Julio Saez-Rodriguez;Andreas Kremling;Ernst Dieter Gilles

  121
  Citations