Erik Kristiansson

Overview

Best Publications

• Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data

  Johan Bengtsson-Palme;Martin Ryberg;Martin Hartmann;Sara Branco

  1304
  Citations

• Intraspecific ITS Variability in the Kingdom Fungi as Expressed in the International Sequence Databases and Its Implications for Molecular Species Identification

  R. Henrik Nilsson;Erik Kristiansson;Martin Ryberg;Nils Hallenberg

  1018
  Citations

• Environmental factors influencing the development and spread of antibiotic resistance

  Johan Bengtsson-Palme;Erik Kristiansson;Erik Kristiansson;D G Joakim Larsson

  995
  Citations

• BacMet: antibacterial biocide and metal resistance genes database

  Chandan Pal;Johan Bengtsson-Palme;Christopher Rensing;Erik Kristiansson

  905
  Citations

• Taxonomic reliability of DNA sequences in public sequence databases: a fungal perspective.

  R. Henrik Nilsson;Martin Ryberg;Erik Kristiansson;Kessy Abarenkov

  790
  Citations

• Co-occurrence of resistance genes to antibiotics, biocides and metals reveals novel insights into their co-selection potential

  Chandan Pal;Johan Bengtsson-Palme;Erik Kristiansson;D. G. Joakim Larsson

  739
  Citations

• Pyrosequencing of Antibiotic-Contaminated River Sediments Reveals High Levels of Resistance and Gene Transfer Elements

  Erik Kristiansson;Erik Kristiansson;Jerker Fick;Anders Janzon;Roman Grabic

  677
  Citations

• Evolutionary Conservation of Human Drug Targets in Organisms used for Environmental Risk Assessments

  Lina-Maria Gunnarsson;Alexandra Jauhiainen;Erik Kristiansson;Olle Nerman

  606
  Citations

• The structure and diversity of human, animal and environmental resistomes

  Chandan Pal;Johan Bengtsson-Palme;Erik Kristiansson;Erik Kristiansson;D. G. Joakim Larsson

  456
  Citations

• The ITS region as a target for characterization of fungal communities using emerging sequencing technologies

  Rolf Henrik Nilsson;Martin Ryberg;Kessy Abarenkov;Elisabet Sjökvist

  345
  Citations

• Shotgun metagenomics reveals a wide array of antibiotic resistance genes and mobile elements in a polluted lake in India

  Johan Bengtsson-Palme;Fredrik Boulund;Jerker Fick;Erik Kristiansson

  328
  Citations

• Elucidating selection processes for antibiotic resistance in sewage treatment plants using metagenomics

  Johan Bengtsson-Palme;Rickard Hammarén;Chandan Pal;Marcus Östman

  310
  Citations

• A Comprehensive, Automatically Updated Fungal ITS Sequence Dataset for Reference-Based Chimera Control in Environmental Sequencing Efforts

  R. Henrik Nilsson;Leho Tedersoo;Martin Ryberg;Erik Kristiansson

  299
  Citations

• The Human Gut Microbiome as a Transporter of Antibiotic Resistance Genes between Continents

  Johan Bengtsson-Palme;Martin Angelin;Mikael Huss;Sanela Kjellqvist

  286
  Citations

• An open source software package for automated extraction of ITS1 and ITS2 from fungal ITS sequences for use in high-throughput community assays and molecular ecology

  R. Henrik Nilsson;R. Henrik Nilsson;Vilmar Veldre;Martin Hartmann;Martin Unterseher

  234
  Citations

• Five simple guidelines for establishing basic authenticity and reliability of newly generated fungal ITS sequences.

  R. Henrik Nilsson;Leho Tedersoo;Kessy Abarenkov;Martin Ryberg

  232
  Citations

• Fluoroquinolones and qnr genes in sediment, water, soil, and human fecal flora in an environment polluted by manufacturing discharges.

  Carolin Rutgersson;Jerker Fick;Nachiket Marathe;Erik Kristiansson

  210
  Citations

• Untreated urban waste contaminates Indian river sediments with resistance genes to last resort antibiotics

  Nachiket P. Marathe;Chandan Pal;Swapnil S. Gaikwad;Viktor Jonsson

  186
  Citations

• Mining metadata from unidentified ITS sequences in GenBank: a case study in Inocybe (Basidiomycota)

  Martin Ryberg;R Henrik Nilsson;Erik Kristiansson;Mats Töpel

  185
  Citations

• ShotgunFunctionalizeR: an R-package for functional comparison of metagenomes

  Erik Kristiansson;Philip Hugenholtz;Daniel Dalevi

  164
  Citations