Kessy Abarenkov

Best Publications

• Towards a unified paradigm for sequence-based identification of fungi

  Urmas Koljalg;Urmas Koljalg;R. Henrik Nilsson;Kessy Abarenkov;Leho Tedersoo

  3731
  Citations

• Global diversity and geography of soil fungi

  Leho Tedersoo;Mohammad Bahram;Sergei Põlme;Urmas Kõljalg

  3617
  Citations

• The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications.

  Rolf Henrik Nilsson;Karl Henrik Larsson;Andy F.S. Taylor;Johan Bengtsson-Palme;Johan Bengtsson-Palme

  3369
  Citations

• The UNITE database for molecular identification of fungi - recent updates and future perspectives

  Kessy Abarenkov;R. Henrik Nilsson;R. Henrik Nilsson;Karl‐Henrik Larsson;Ian J. Alexander

  2056
  Citations

• Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data

  Johan Bengtsson-Palme;Martin Ryberg;Martin Hartmann;Sara Branco

  1304
  Citations

• UNITE: a database providing web-based methods for the molecular identification of ectomycorrhizal fungi

  Urmas Kõljalg;Karl-Henrik Larsson;Kessy Abarenkov;R. Henrik Nilsson

  1268
  Citations

• FungalTraits: a user-friendly traits database of fungi and fungus-like stramenopiles

  Sergei Põlme;Sergei Põlme;Kessy Abarenkov;R. Henrik Nilsson;Björn D. Lindahl

  1029
  Citations

• Fungal community analysis by high-throughput sequencing of amplified markers - a user's guide

  Björn D. Lindahl;R. Henrik Nilsson;Leho Tedersoo;Kessy Abarenkov

  985
  Citations

• Taxonomic reliability of DNA sequences in public sequence databases: a fungal perspective.

  R. Henrik Nilsson;Martin Ryberg;Erik Kristiansson;Kessy Abarenkov

  790
  Citations

• High-level classification of the Fungi and a tool for evolutionary ecological analyses

  Leho Tedersoo;Leho Tedersoo;Leho Tedersoo;Santiago Sánchez-Ramírez;Urmas Kõljalg;Urmas Kõljalg;Mohammad Bahram;Mohammad Bahram

  703
  Citations

• 454 Pyrosequencing and Sanger sequencing of tropical mycorrhizal fungi provide similar results but reveal substantial methodological biases

  Leho Tedersoo;Leho Tedersoo;R. Henrik Nilsson;R. Henrik Nilsson;Kessy Abarenkov;Teele Jairus

  660
  Citations

• Shotgun metagenomes and multiple primer pair-barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi

  Leho Tedersoo;Sten Anslan;Mohammad Bahram;Sergei Põlme

  595
  Citations

• The UNITE database for molecular identification and taxonomic communication of fungi and other eukaryotes: sequences, taxa and classifications reconsidered

  Unknown

  578
  Citations

• Strong host preference of ectomycorrhizal fungi in a Tasmanian wet sclerophyll forest as revealed by DNA barcoding and taxon‐specific primers

  Leho Tedersoo;Leho Tedersoo;Teele Jairus;Teele Jairus;Bryony M. Horton;Kessy Abarenkov

  502
  Citations

• ITS1 versus ITS2 as DNA metabarcodes for fungi.

  R. Blaalid;S. Kumar;R. H. Nilsson;K. Abarenkov

  462
  Citations

• Finding needles in haystacks: Linking scientific names, reference specimens and molecular data for Fungi

  Conrad L. Schoch;Barbara Robbertse;Vincent Robert;Duong Vu

  445
  Citations

• FungalRoot: global online database of plant mycorrhizal associations.

  Nadejda A. Soudzilovskaia;Stijn Vaessen;Milagros Barcelo;Jinhong He

  431
  Citations

• Resistance and resilience of the forest soil microbiome to logging-associated compaction.

  Martin Hartmann;Pascal A Niklaus;Stephan Zimmermann;Stefan Schmutz

  404
  Citations

• Tree diversity and species identity effects on soil fungi, protists and animals are context dependent

  Leho Tedersoo;Mohammad Bahram;Tomáš Cajthaml;Sergei Põlme

  389
  Citations

• PlutoF—a Web Based Workbench for Ecological and Taxonomic Research, with an Online Implementation for Fungal ITS Sequences

  Kessy Abarenkov;Kessy Abarenkov;Leho Tedersoo;Leho Tedersoo;R. Henrik Nilsson;R. Henrik Nilsson;Kai Vellak

  366
  Citations