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Genetics

D-Index
71
Citations
19512
World Ranking
2191
National Ranking
993

Overview

Dmitry A. Rodionov is affiliated with the Sanford Burnham Prebys Medical Discovery Institute in the United States. Their research spans a variety of topics within biochemistry, genetics, molecular biology, and medicine, contributing extensively to several intersecting fields of study.

Dmitry's main fields of study include:

  • Biochemistry, Genetics and Molecular Biology
  • Medicine

Within these fields, the scientist has further specialized subfields such as:

  • Molecular Biology
  • Nutrition and Dietetics
  • Food Science
  • Genetics
  • Infectious Diseases

The research topics frequently addressed in Dmitry's work are:

  • Gut microbiota and health
  • Probiotics and Fermented Foods
  • Infant Nutrition and Health
  • Clostridium difficile and Clostridium perfringens research
  • Bacterial Genetics and Biotechnology
  • Microbial Metabolic Engineering and Bioproduction
  • Child Nutrition and Water Access

Notable recent scientific publications authored or coauthored by Dmitry include:

  • B Vitamins and Their Role in Immune Regulation and Cancer, 2020, Nutrients
  • Duodenal Microbiota in Stunted Undernourished Children with Enteropathy, 2020, New England Journal of Medicine
  • Bifidobacterium infantis treatment promotes weight gain in Bangladeshi infants with severe acute malnutrition, 2022, Science Translational Medicine
  • Evaluating microbiome-directed fibre snacks in gnotobiotic mice and humans, 2021, Nature
  • Priority effects shape the structure of infant-type Bifidobacterium communities on human milk oligosaccharides, 2022, The ISME Journal

Dmitry collaborates frequently with researchers such as:

  • Andrei L. Osterman
  • Jeffrey I. Gordon
  • Michael J. Barratt
  • Aleksandr A. Arzamasov
  • Martin L. Hibberd

The scientist regularly publishes in venues including:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Gut Microbes
  • mSystems
  • Proceedings of the National Academy of Sciences
  • Microorganisms

Best Publications

  • The Subsystems Approach to Genome Annotation and its Use in the Project to Annotate 1000 Genomes

    Ross Overbeek;Tadhg P. Begley;Ralph M. Butler;Jomuna Choudhuri

  • Towards environmental systems biology of Shewanella

    James K. Fredrickson;Margaret F. Romine;Alexander S. Beliaev;Jennifer M. Auchtung

  • Gut bacteria that prevent growth impairments transmitted by microbiota from malnourished children

    Laura V. Blanton;Mark R. Charbonneau;Tarek Salih;Michael J. Barratt

  • Comparative Genomics of the Vitamin B12 Metabolism and Regulation in Prokaryotes

    Dmitry A. Rodionov;Alexey G. Vitreschak;Andrey A. Mironov;Mikhail S. Gelfand

  • Comparative Genomics of Thiamin Biosynthesis in Procaryotes NEW GENES AND REGULATORY MECHANISMS

    Dmitry A. Rodionov;Alexey G. Vitreschak;Andrey A. Mironov;Mikhail S. Gelfand

  • RegPrecise 3.0--a resource for genome-scale exploration of transcriptional regulation in bacteria.

    Pavel S Novichkov;Alexey E Kazakov;Dmitry A Ravcheev;Dmitry A Ravcheev;Semen A Leyn

  • New substrates for TonB-dependent transport: do we only see the 'tip of the iceberg'?

    Kristine Schauer;Kristine Schauer;Dmitry A. Rodionov;Dmitry A. Rodionov;Hilde de Reuse

  • Regulation of riboflavin biosynthesis and transport genes in bacteria by transcriptional and translational attenuation

    Alexey G. Vitreschak;Dmitry A. Rodionov;Andrey A. Mironov;Mikhail S. Gelfand

  • Effects of microbiota-directed foods in gnotobiotic animals and undernourished children

    Jeanette L. Gehrig;Siddarth Venkatesh;Hao Wei Chang;Matthew C. Hibberd

  • Dissimilatory Metabolism of Nitrogen Oxides in Bacteria: Comparative Reconstruction of Transcriptional Networks

    Dmitry A Rodionov;Inna L Dubchak;Adam P Arkin;Eric J Alm

  • Comparative and functional genomic analysis of prokaryotic nickel and cobalt uptake transporters: evidence for a novel group of ATP-binding cassette transporters.

    Dmitry A. Rodionov;Peter Hebbeln;Mikhail S. Gelfand;Thomas Eitinger

  • A Novel Class of Modular Transporters for Vitamins in Prokaryotes

    Dmitry A. Rodionov;Dmitry A. Rodionov;Peter Hebbeln;Aymerick Eudes;Josy ter Beek

  • IscR‐dependent gene expression links iron‐sulphur cluster assembly to the control of O2‐regulated genes in Escherichia coli

    Jennifer L. Giel;Dmitry Rodionov;Mingzhu Liu;Frederick R. Blattner

  • Comparative genomic analyses of nickel, cobalt and vitamin B12 utilization.

    Yan Zhang;Dmitry A Rodionov;Dmitry A Rodionov;Mikhail S Gelfand;Mikhail S Gelfand;Vadim N Gladyshev

  • Regulation of the vitamin B12 metabolism and transport in bacteria by a conserved RNA structural element.

    Alexey G. Vitreschak;Dmitry A. Rodionov;Andrey A. Mironov;Mikhail S. Gelfand

  • Canonical and ECF-type ATP-binding cassette importers in prokaryotes: diversity in modular organization and cellular functions

    Thomas Eitinger;Dmitry A. Rodionov;Dmitry A. Rodionov;Mathias Grote;Erwin Schneider

  • Comparative Genomic Reconstruction of Transcriptional Regulatory Networks in Bacteria

    Dmitry A. Rodionov

  • Conservation of the Biotin Regulon and the BirA Regulatory Signal in Eubacteria and Archaea

    Dmitry A. Rodionov;Andrei A. Mironov;Mikhail S. Gelfand

  • Regulation of lysine biosynthesis and transport genes in bacteria: yet another RNA riboswitch?

    Dmitry A. Rodionov;Alexey G. Vitreschak;Andrey A. Mironov;Mikhail S. Gelfand

  • Functional Metabolic Map of Faecalibacterium prausnitzii, a Beneficial Human Gut Microbe

    Almut Katrin Heinken;Almut Katrin Heinken;M Tanweer Khan;Giuseppe Paglia;Dmitry A Rodionov;Dmitry A Rodionov

Frequent Co-Authors

Mikhail S. Gelfand
Mikhail S. Gelfand Skolkovo Institute of Science and Technology
Andrei L. Osterman
Andrei L. Osterman Discovery Institute
Adam P. Arkin
Adam P. Arkin Lawrence Berkeley National Laboratory
Inna Dubchak
Inna Dubchak Lawrence Berkeley National Laboratory
Margaret F. Romine
Margaret F. Romine Pacific Northwest National Laboratory
Jeffrey I. Gordon
Jeffrey I. Gordon Washington University in St. Louis
James K. Fredrickson
James K. Fredrickson Pacific Northwest National Laboratory
Ross Overbeek
Ross Overbeek Argonne National Laboratory
Valérie de Crécy-Lagard
Valérie de Crécy-Lagard University of Florida

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