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Daisuke Shibata

Daisuke Shibata

D-Index & Metrics

Genetics

D-Index
77
Citations
26873
World Ranking
1753
National Ranking
68

Overview

Daisuke Shibata is affiliated with Kyoto University in Japan and has contributed substantially to research in biochemistry, genetics, molecular biology, and agricultural and biological sciences. Their work spans multiple subfields including molecular biology, plant science, electrical and electronic engineering, materials chemistry, and electronic, optical, and magnetic materials.

The scientist's research topics cover a diverse range of subjects such as advancements in battery materials, advanced battery materials and technologies, metabolomics and mass spectrometry studies, supercapacitor materials and fabrication, plant molecular biology research, plant tissue culture and regeneration, and plant biochemistry and biosynthesis.

Among their recent papers are several notable publications:

  • TOMATOMET: A metabolome database consists of 7118 accurate mass values detected in mature fruits of 25 tomato cultivars (2021, Plant Direct)
  • A Cytosol-Localized Geranyl Diphosphate Synthase from Lithospermum erythrorhizon and Its Molecular Evolution (2020, PLANT PHYSIOLOGY)
  • Durable Manganese-Based Li-Excess Electrode Material without Voltage Decay: Metastable and Nanosized Li2MnO1.5F1.5 (2023, ACS Energy Letters)
  • Metabolome Analysis Identified Okaramines in the Soybean Rhizosphere as a Legacy of Hairy Vetch (2020, Frontiers in Genetics)
  • Improved electrode reversibility of anionic redox with highly concentrated electrolyte solution and aramid-coated polyolefin separator (2023, Energy Advances)

Their frequent coauthors include Nozomu Sakurai, Hideyuki Suzuki, Toshiaki Ohta, Yuki Orikasa, and Takeshi Ara.

Daisuke Shibata commonly publishes in venues such as Plant Biotechnology, bioRxiv (Cold Spring Harbor Laboratory), Electrochemistry, Plant and Cell Physiology, and ECS Meeting Abstracts.

Best Publications

  • The tomato genome sequence provides insights into fleshy fruit evolution

    Shusei Sato;Satoshi Tabata;Hideki Hirakawa;Erika Asamizu

  • MassBank: a public repository for sharing mass spectral data for life sciences.

    Hisayuki Horai;Masanori Arita;Masanori Arita;Shigehiko Kanaya;Yoshito Nihei

  • Omics-based identification of Arabidopsis Myb transcription factors regulating aliphatic glucosinolate biosynthesis

    Masami Yokota Hirai;Kenjiro Sugiyama;Yuji Sawada;Takayuki Tohge

  • Leaf senescence and starvation-induced chlorosis are accelerated by the disruption of an Arabidopsis autophagy gene.

    Hideki Hanaoka;Takeshi Noda;Takeshi Noda;Yumiko Shirano;Tomohiko Kato

  • Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation

    Koichi Hori;Fumito Maruyama;Takatomo Fujisawa;Tomoaki Togashi

  • Characterization of the ABA-regulated global responses to dehydration in Arabidopsis by metabolomics.

    Kaoru Urano;Kyonoshin Maruyama;Yoshiyuki Ogata;Yoshihiko Morishita

  • Modified colorimetric ninhydrin methods for peptidase assay.

    Etsushiro Doi;Daisuke Shibata;Teruyoshi Matoba

  • 12-oxo-phytodienoic acid triggers expression of a distinct set of genes and plays a role in wound-induced gene expression in Arabidopsis.

    Nozomi Taki;Yuko Sasaki-Sekimoto;Takeshi Obayashi;Akihiro Kikuta

  • Elucidation of Gene-to-Gene and Metabolite-to-Gene Networks in Arabidopsis by Integration of Metabolomics and Transcriptomics

    Masami Yokota Hirai;Marion Klein;Yuuta Fujikawa;Mitsuru Yano

  • FILAMENTOUS FLOWER, a meristem and organ identity gene of Arabidopsis, encodes a protein with a zinc finger and HMG-related domains

    Shinichiro Sawa;Keiro Watanabe;Koji Goto;Eiko Kanaya

  • ATTED-II: a database of co-expressed genes and cis elements for identifying co-regulated gene groups in Arabidopsis

    Takeshi Obayashi;Kengo Kinoshita;Kenta Nakai;Masayuki Shibaoka

  • Coordinated activation of metabolic pathways for antioxidants and defence compounds by jasmonates and their roles in stress tolerance in Arabidopsis

    Yuko Sasaki-Sekimoto;Nozomi Taki;Takeshi Obayashi;Mitsuko Aono

  • Metabolic pathways involved in cold acclimation identified by integrated analysis of metabolites and transcripts regulated by DREB1A and DREB2A.

    Kyonoshin Maruyama;Migiwa Takeda;Satoshi Kidokoro;Kohji Yamada

  • Approaches for extracting practical information from gene co-expression networks in plant biology.

    Koh Aoki;Yoshiyuki Ogata;Daisuke Shibata

  • STOP1 Regulates Multiple Genes That Protect Arabidopsis from Proton and Aluminum Toxicities

    Yoshiharu Sawaki;Satoshi Iuchi;Yasufumi Kobayashi;Yuriko Kobayashi

  • Monitoring of methyl jasmonate-responsive genes in Arabidopsis by cDNA macroarray: self-activation of jasmonic acid biosynthesis and crosstalk with other phytohormone signaling pathways.

    Yuko Sasaki;Erika Asamizu;Daisuke Shibata;Yasukazu Nakamura

  • Complementation of plant mutants with large genomic DNA fragments by a transformation-competent artificial chromosome vector accelerates positional cloning.

    Yao-Guang Liu;Yumiko Shirano;Hidehiro Fukaki;Yukihiro Yanai

  • Metabolite annotations based on the integration of mass spectral information

    Yoko Iijima;Yukiko Nakamura;Yoshiyuki Ogata;Ken’ichi Tanaka

  • Spermidine Synthase Genes Are Essential for Survival of Arabidopsis

    Akihiro Imai;Takashi Matsuyama;Takashi Matsuyama;Yoshie Hanzawa;Yoshie Hanzawa;Takashi Akiyama

  • Overexpression of Mitochondrial Citrate Synthase in Arabidopsis thaliana Improved Growth on a Phosphorus-Limited Soil

    Hiroyuki Koyama;Ayako Kawamura;Tomonori Kihara;Tetsuo Hara

Frequent Co-Authors

Koh Aoki
Koh Aoki Osaka Metropolitan University
Satoshi Tabata
Satoshi Tabata Tokyo University of Science
Hideyuki Suzuki
Hideyuki Suzuki Kyoto Institute of Technology
Tomohiko Kato
Tomohiko Kato Kazusa DNA Research Institute
Hiroyuki Ohta
Hiroyuki Ohta Tokyo Institute of Technology
Yasukazu Nakamura
Yasukazu Nakamura National Institute of Genetics
Shusei Sato
Shusei Sato Tohoku University
Tatsuru Masuda
Tatsuru Masuda University of Tokyo

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