20 Best Scientific Data Management Systems in 2022

20 Best Scientific Data Management Systems in 2022
Imed Bouchrika, Phd by Imed Bouchrika, Phd
Chief Data Scientist & Head of Content

In the last two years, the pandemic propelled the growth of scientific data management systems (SDMS) significantly. Research data management, in general, is challenging, but with the emergence of cloud-based management, lab researchers, scientists, and analysts can now better store and search for lab data and knowledge, speed up workflows and approval processes, and optimize staff collaboration. Any lab—clinical, research, contract, or pharmaceutical—can use SDMS to ensure data integrity, regulatory compliance, and a single source of truth.

The best scientific data management systems manage unstructured data formats, analyze data and create lab reports, import/export data, interact with lab instruments, systems, and databases for interoperability, and integrate LIMS and e-notebooks.

This guide gives you the trends to watch out for in SDMS, the importance of this system, and list of SDMS worth looking into.

Best Scientific Data Management Systems Table of Contents

  1. Scientific Data Management Systems 2022 Trends
  2. Benefits of Using Scientific Data Management Systems
  3. List of the Best Scientific Data Management Systems

Scientific Data Management Systems 2022 Trends

Scientific research is one activity that the world can’t do without. Research by top environmental and medical scientists alone is vital, not to mention those of other scientific experts. While the United States has been taking a lead in scientific research, the demand for more scientific research is a global phenomenon. Even Japan is looking to revitalize its research.

Here are trends that every organization doing scientific research and development ought to watch out for.

Growing Amounts of Budget Allocation and Grants

In fiscal year 2022, the U.S. government awarded $38.4 billion in grants from $30 billion the previous year. Scientific and health research remain to take up a big chunk of this budget with 42% in 2022. (TAGGS, 2022)

The substantial grants allow government scientific agencies to update their lab inventories and  manage them with capable lab inventory management software solutions.

Source: U.S. Department of Health and Human Services

Meanwhile, the National Institutes of Health (NIH) spent $17.6 billion on clinical research in 2021, which include the cost spent in clinical research software, not so much different from the previous year. However, the spending is expected to rise to around $18 billion in 2022 and 2023. (NIH, 2022)

Source: National Institutes of Health

Over three-quarters of Americans say investing in research is important, with 92% saying finding new ways of preventing, treating, and curing new illnesses is vital. About 90% say ensuring the safety and availability of clean water is important while 87% find preventing another pandemic is crucial. (Research!America, 2022)

Source: Research!America

Growth in Research and Development Revenue

The U.S. research and development market for physical, engineering, and life sciences is expected to reach $183 billion by 2024 (Statista, 2021a) while scientific R&D services are expected to generate $188 billion. (Statista, 2021b)

2024 R&D market for physical, engineering, life sciences

Biotech Showing Potentials

More than half of American adults believe the U.S. will lead in science and technology in 2030. In 2010, the U.S. led in life science technologies. In 2018, the country had 1.9 million bioscience jobs, with the majority in research, testing, and labs. (Research!America, 2022)

Source: Statista

During the COVID-19 pandemic, biotech companies like BioNTech and Moderna developed and manufactured vaccines in record time. The NIH spent $7,847 million on biotechnology in 2021 and is expected to spend around $8,000 billion in 2022. (NIH, 2022) Now is the era of biotech, and investors are driving the shift from pharma. The works of biology and biochemist scientists have become ever more crucial.

With capable personnel helped by the best LMS for employee training, the U.S. biotech companies are expected to remain at the forefront of this crucial industry.

Source: National Institutes of Health

Continuous Leveraging of Software

The SDMS market is expected to grow at an 8.30% CAGR until 2027. Demand for lab automation will boost the market whereas cloud-based laboratory informatics will create new market opportunities. Development of integrated lab informatics solutions, rising demand from academic research institutes, growing use of lab informatics solutions in the cannabis industry, and technological advancement are expected to drive the SDMS market. (Data Bridge, 2021)

cagr for scientific data management systems through 2027

The global laboratory informatics market (LIM) is expected to reach $5.6 billion by 2026, up from $3.4 billion in 2021. This market is driven by the growing need for laboratory automation, biobanks/biorepositories, and pharmaceutical/biotech R&D spending. Lack of integration standards and interoperability challenges may limit the market growth. (Markets and Markets, 2022)

global LIM market value by 2026

Benefits of Using Scientific Data Management Systems

Lab researchers, scientists, and analysts constantly store, analyze, and process countless scientific data. All this data must be stored securely while allowing authorized users and units easy access. This is where SDMS becomes crucial.

Here are the benefits of using SDMS.

  • Archive raw instrument data files and an XML representation. Lab technicians can recover and access both files quickly using the system. No need to search through stacks of papers for information. Any device can access standardized data. As such, the system simplifies lab communication and data transfer.
  • Digitization. SDMS reduces daily document output as digital storage reduces the need to print them. SDMS minimizes wasted paper and money. Note to mention it makes finding information easier by storing all data in one place.
  • Manage lab data. SDMS streamlines lab processes like document circulation. It improves lab efficiency and productivity.
  • Improve lab workflows. SDMS reduces the number of documents, minimizing confusion or information loss and allowing for less viewing and approving time.
  • Streamline lab document circulation and data transfer. Streamlined and improved processes increase work efficiency, improving lab assistant productivity and performance.
  • Improve lab data management. Data can be easily transferred from one device or paper copy. SDMS renders raw data as accurate, normalized XML, making documents portable across systems and applications. Platforms can quickly exchange data, so you get easy migration of archive files.
  • Allows compliance. SDMS is used in labs across industries to manage and analyze samples, tests, and test results. Many of these industries and their laboratories are regulated. Noncompliance with regulations can cause huge losses and fraud.

List of the Best Scientific Data Management Systems

1. Labguru: All-in-One Electronic Lab Notebook

Labguru dashboard

Labguru is a cloud-based desktop and mobile ELN, LIMS, and informatics platform for life science research and industry. It maintains laboratory data and inventories, contains molecular biology and chemistry tools, automates the lab, and provides data insights to make labs function more efficiently. Labguru lets scientists build experiments and workflows, capture organized and unstructured data, and manage projects. Custom experiment templates, protocol integration, and other cutting-edge features improve data quality, expedite operations, and save expenses.


  • Data Storage
  • Inventory Management
  • Protocol Templates
  • Intellectual Protection and Compliance
  • Comprehensive Search Functionality
  • Data Access Authorization
  • Inventory Control
  • Inventory Management
  • Health & Safety
  • Records Maintenance
  • Excel Data Import
  • User Access Settings


  • Contact Labguro for pricing

2. SciNote: Keep Your Research Organized in One Place

SciNote dashboard

SciNote supports experts in government, industrial, SME, and academic research labs. Its mission is to help humanity benefit from science and preserve research data. SciNote helps researchers looking to cut costs and boost lab productivity.


  • Data Storage
  • Inventory Management
  • Protocol Templates
  • Intellectual Protection and Compliance
  • Comprehensive Search Functionality
  • Data Access Authorization


  • 14-day free trial
  • Request quote for Advanced and Platinum Industry Plans or for an Academic Plan.

3. Benchling: Cloud-Based Platform for Biotechnology R&D

Benchling dashboard

Benchling is a modern research platform that connects the entire R&D lifecycle, from project documentation to sample management. It replaces legacy ELN and LIMS with seven integrated apps: Notebook, Molecular Biology, Registry, Inventory, Requests, Workflows, and Insights, providing a unified platform and seamless user experience for codeless configuration, lab automation, and API use. Benchling helps forward-thinking companies accelerate their digital lab transformation to make better, faster decisions.


  • Data Storage
  • Inventory Management
  • Protocol Templates
  • Comprehensive Search Functionality
  • Data Access Authorization


  • Free for academics
  • Contact Sales for pricing of Professional and Enterprise plans

4. MediaLab Document Control: Manage Your Laboratory’s Policies, Procedures, and Documentation

MediaLab Document Control dashboard

MediaLab Document Control manages policies, procedures, and documentation. It ensures compliance with all standards, regulations, and best practices. It also provides an automated, centralized platform for document approvals, workflows, edits, sign-offs, audits, and more. The system is flexible and customizable, ready to meet lab needs.


  • Digital documents and version control
  • Documents from all sites standardized
  • 21 CFR Part 11-compliant electronic signatures
  • Custom approval workflows
  • Easy document searching, and more


  • 30-day free trial
  • Offers subscription-based solutions. Non-rolling subscriptions are renewed annually
  • Request for quote

5. Genemod: Collaborate and Accelerate Science

Genemod dashboard

Genemod accelerates life sciences R&D by improving team collaboration so scientists can focus on big ideas. Genemod’s cutting-edge technology speeds up therapeutic breakthroughs. This lab software centralizes and streamlines the R&D lifecycle, from data acquisition to inventory management and reporting.


  • Visualize inventory
  • Collaborate through Notebook
  • Track consumables
  • Project management
  • Team management
  • Integrate with third-party apps (e.g. Slack, Excel, Sharepoint)
  • View revision history
  • Two-factor authentication
  • Onboarding and training support


  • Offers free subscription
  • $720 annually for the Team plan and $3,600 for the Business plan

6. [FP]-LIMS: Get a Headstart in the Lab

[FP]-LIMS dashboard

Fink & Partner GmbH’s Quality Management [FP]-LIMS improves quality, reduces costs, and streamlines lab processes. [FP]-LIMS gives you a unified management system to monitor all your individualistic work processes and fulfill your documentation obligations to avoid errors, manage samples, evaluate KPIs, and react quickly to workflow bottlenecks.


  • Configurable views and tables, analysis filters, color-coded quality violations, and quick search.
  • Analysis editing: Freely configurable method, editing function detail views
  • Tables, reports, and print formats are configurable.
  • Standard print routines, Excel export
  • Manage quality violations, value limits, and versioning.
  • Characteristics, ident fields, dimensions, conversion factors, and dynamic decimal places.
  • Archive function
  • Language settings, accounts/groups, rights groups


  • Offers free subscription
  • Contact Sales for Light, Standard, and Professional plans

7. Labstep: Designed to Uncover Real-time Data

Labstep dashboard

Labstep combines ELN, LIMS, LES, and order management in a single collaborative environment. It streamlines research data documentation and knowledge transfer by capturing real-time process data. It automatically creates an audit trail of research activity, saving researchers time and boosting productivity.


  • Electronic notebook (ELN)
  • Protocol library
  • Inventory management (LIMS)
  • Workspaces: real-time collaboration and sharing
  • Instrument and software integration
  • 24/7 customer support
  • Ordering Service with a dedicated Labstep agent


  • Labstep Academia (free, forever)
  • Labstep Pro & Enterprise (get in touch with the vendor)

8. MediGrid: Helps Improve the Speed and Quality of Medical Research

MediGrid dashboard

MediGrid‘s smart data ingestion engine structures, curates, transforms, and harmonizes data, allowing researchers to conduct multi-study analyses or review adverse effects across studies. Throughout your research, you need a real-time view of patient safety, especially when monitoring AE and SAE before or after market introduction. MediGrid can detect and warn about safety risks, improving patient safety and protecting your reputation. Ultimately, MediGrid makes data FAIR: Findable, Accessible, Interoperable, and Reusable.


  • ISO 27001 certified
  • Authentication
  • Access management
  • Audit trail
  • Encryption
  • Anonymization
  • Remove personal data (right to be forgotten)
  • Read Excel, CDISC SDTM/ADAM, SAS files
  • Setup schemas and data structures from Excel template
  • Data quality checks
  • Data curation
  • Data catalog
  • Data dictionary
  • Support for LOINC, SNOMED and Athena
  • OHDSI OMOP common data model


  • Contact MedGrid for pricing

9. SciCord: Simplifies Processes

Scicord dashboard

SciCord ELN/LIMS meets lab and manufacturing requirements. Validated formulas eliminate calculation errors, improving compliance. Automatic entry verification flags Out-of-Spec situations. Intelligent scans alert reviewers of potential precision, balance, calibration, and validation issues. Electronic signatures and audit trails comply with CFR 21 Part11. Custom parsing on attached files extracts instrument data and records it in SciCord experiments for calculations, statistical analysis, and/or summarization. Ultimately, SciCord makes scientific data management simple.


  • Equipment logbook
  • Chemistry inventory
  • Resources
  • Batch Records
  • Solution/Standard Preparations
  • Training
  • Labels
  • Sample Management
  • Document Management
  • Synthetic Chemistry
  • Formulation
  • Chromatography
  • Systems Integrations
  • Stability
  • Water and Wastewater Testing


  • Contact SciCord for quotes

10. Thermo Scientific SampleManager LIMS: Drives Productivity and Ensures Compliance

Thermo Scientific SampleManager LIMS dashboard

Thermo Scientific SampleManager LIMS combines laboratory management, data management, an electronic lab notebook, and process execution or procedural ELN in a single solution. This software is used by pharmaceutical, food and beverage, oil and gas, petrochemical, water and environmental, manufacturing, and contract testing laboratories across all industries. SampleManager LIMS can be deployed on-premise, on a customer-managed cloud, or on Amazon Web Services’ fully managed cloud (AWS).


  • Instrument Management
  • Workflow Management
  • Sample Management
  • Data Warehouse
  • Inventory Management
  • Document Management
  • QA/QC


  • Contact Thermofisher for pricing

11. Shimadzu LabSolutions: Secures Information in Networked Laboratories

Shimadzu LabSolutions dashboard

Shimadzu LabSolutions offers an innovative operating environment and complete data management for networked labs. It allows pharmaceutical, chemical, and food industries to use LCs and GCs for quality control and R&D. It is a faster and easier-to-use software that addresses increasing demand for analysis of samples. It ensures compliance with regulations and guidelines and efficient management of instruments and analytical data.


  • Comfortable Operating Environment
  • Safe and Secure Data Management
  • Total Support for Regulatory Compliance
  • Multi-Data Report
  • Peak Integration Algorithm
  • Report Set
  • Controlling Agilent’s HPLC and GC
  • Controlling Thermo’s HPLC and GC


Contact Shimadzu for pricing

12. RSpace: Integrated Inventory and Research Data

RSpace dashboard

RSpace is based on modern technologies and designed for academic institutions.
It is an affordable and secure electronic lab notebook (ELN) that catalyzes research and allows organizations to enjoy the benefits, efficiencies, and long-term cost savings of centralized, paperless data storage, lab management, IP protection, secure collaboration, sample tracking, and integration with your institute’s existing archiving system.


  • Fully-featured ELN
  • Choose between on-premises deployment or a private AWS instance in a location of your choice
  • RSpace Inventory
  • Integrations
  • Comprehensive training
  • Unlimited teaching licenses at no extra cost
  • SSO support through SAML2 (Shibboleth) and LDAP (Active Directory)
  • System administrator role and features
  • Hierarchical tiered admin
  • Co-branding
  • HIPAA compliance (additional charge)


  • Offers free version (Community)
  • Team Plan $2,900 (academic annual subscription) $4,900 (commercial annual subscription) up to 15 users
  • Enterprise Plan $120 per user (academic annual subscription) $240 per user (commercial annual subscription) Minimum order of $10,000

13. WinWedge: Serial Device Data Collection Software

WinWedge dashboard

WindWedge is a serial data collection and management software. IT can capture data directly to Excel, Access, or a web page. You can control your device with hot keys, buttons, and DDE via a COM port. The software also collects data from scales, meters, sensors, micrometers, GPS, PLCs, and analyzers. It can parse, filter, and format your device data and control instruments via the serial port.


  • Supports COM1-9. Install on up to nine serial ports to collect data from multiple devices.
  • Keystroke data transfer to any application.
  • DDE for Windows apps. Includes advanced DDE commands that let other Windows apps control all Wedge functions, including serial output. DDE allows you to create powerful device control interfaces from Excel, Access, etc.
  • Basic Data Parsing Splits Incoming Data Into Fields Don’t enter unnecessary data.
  • A Powerful Serial Data Analyzer lets you preview serial data and debug serial communications.
  • Data Filtering lets you remove non-numeric characters from input fields or ignore them. Pro adds filtering options.
  • Translation tables pre-transfer. Translate ASCII to PC keystrokes.
  • Inserting keystroke macros. Before, after, or within serial input data, add keystrokes or macros. Keystroke macros let you control serial data in Keystroke Mode.
  • Date/time stamping automatically. Date/time stamp serial input data.
  • Twenty button-controlled output strings. When buttons are clicked, send data out the serial port or lower the PC’s DTR line. Use the Output Buttons to send control data to serial devices.
  • Each data record is acknowledged by sending a string to the serial device.
  • Auto-prompting timer and Send Wedge prompts or commands at regular intervals.
  • Customizable communications parameters. 5,6,7,8 data bits; 1 or 2 stop bits; EVEN, ODD, MARK, SPACE or NO parity.
  • Flow control hardware/software. 128- to 32K-byte input/output buffer sizes. New 16550 UARTs and all IRQs are supported.


  • $299 one-time payment
  • Free Trial available
  • 90-day money-back guarantee

14. Uncountable: Built for R&D Management

uncountable dashboard

Uncountable is a cloud-based LIMS that helps material, chemical, and life sciences companies manage, share, and analyze experimental data. Researchers can search the repository for experiment data by measurements, ingredients, or process parameters. It lets users create recipes, track outputs, and correlations, and perform complex calculations. The AI-powered platform predicts formulation performance and offers optimized suggestions. Supervisors can assign and notify lab requests. Users can design experiments and test hypotheses.


  • Certification of Analysis
  • Compliance Tracking
  • EDI
  • Electronic Laboratory Notebook
  • Instrument Management
  • Inventory Management
  • Workflow Management


  • Contact Uncountable for demo and pricing

15. STARLIMS: A Central Repository for your Lab’s Valuable Data

Starlims dashboard

STARLIMS supports organizations’ changing data management demands. Its SDMS stores your lab’s documents and data and simplifies access and sharing. STARLIMS’ other informatics applications collect, process, and evaluate data to speed up product development. It provides data and insights at every stage of medication discovery and safety. Its analytics products’ data visualization features help make confident business decisions.


  • Public or private AWS cloud
  • STARLIMS Licensing, Maintenance, Support
  • 99.9% availability of all infrastructure software licensing applications
  • Application environment development, test, and production
  • Installation, patch management, and malware protection
  • Monitoring and alerts.
  • Database backup and retention
  • Restoration (Recovery Time Objective 4 hours and Recovery Point Objective 15 minutes)
  • HIPAA/GDPR compliance


  • Contact STARLIMS for pricing

16. Cytobank: Keeps Data Organized

Cytobank dashboard

Cytobank is a cloud-based platform for machine-learning-assisted single-cell data processing. Enterprise licenses give larger research teams in institutions, biopharma R&D, or clinical research organizations access to a private cloud. Cytobank lets you manage and store flow cytometry, mass cytometry, and other single-cell data from any web-based device.


  • The easy-to-use interface allows the creation of a data analysis workflow.
  • Analyze several single-cell data sets using rich visualization capabilities.
  • Scalability
  • Project roles coordinate project participants.
  • Limit members’ data access
  • Change project experiments
  • The Experiment Summary page consolidates experiment information.


  • Request a free trial
  • Request quote

17. LabKey: Flexible Research Data Management and Workflow Solutions

LabKey dashboard

LabKey is a highly flexible lab data management software for data integration, analysis, workflows, security, and compliance. Data from laboratory instruments, software, and other databases can be readily integrated into one safe system. LabKey maintains the integrity of your data with quality control workflows and automation tools. Its data can be studied using built-in visualization and reporting tools or third-party software.


  • NAb, Luminex, flow cytometry, and proteomics instrument support
  • Use general-purpose templates, model, and import lab data.
  • Connect databases and lab software
  • Clean and shape your data and automate import calculations.
  • Align and unify variable-source data
  • Use Data validators and range checks to ensure correct data entry.
  • Track QC metrics with quality control reports.
  • Automate QC and data cleansing
  • QC workflows support internal processes and standards.
  • Use SQL to securely query integrated data and join tables.
  • Connect RStudio, Tableau, Plotly, SQL Server Reporting Service, REDCap, and more.
  • LabKey Server Assay Requests & Fulfillment Tracking can provide live R reports.


  • Free trial available
  • Contact LabKey for pricing

18. Arxspan Assay: Intuitive and Easy to Use

Arxspan dashboard

Arxspan Assay is a biological data management system designed for centrally administered studies with various research sites. It gives study coordinators an integrated view of study activities and assay results from research teams and empowers individual researchers to collaborate. It is a fully web-based data management and collaboration tool that lets you manage lab workflow and processes in a single system without custom coding. It enhances internal and external research collaboration.


  • Data store and search platform for endpoints
  • User-defined assays, plate layouts, and data upload templates
  • Compatible with XLfit® and GraphPad Prism
  • Raw and computed plate readouts
  • Automated data calculation
  • Curves and heatmaps
  • Curve points
  • Custom tables for test data display
  • Access restrictions
  • Attachments with previews
  • Arxspan modules seamlessly integrated


  • Contact Arxspan for pricing

19. Waters NuGenesis SDMS: Automated Data Repository

Waters NuGenesis SDMS dashboard

NuGenesis SDMS is an automated data repository. It imports all instruments, researchers, and external data into a consolidated repository. You may quickly start research, exchange outcomes, and share data. It automatically captures, indexes, and stores lab data in a regulatory-compliant environment following creation or modification. The software manages printed data, including instrument reports, converting data to IUPAC JCAMP-DX and other non-proprietary formats.


  • Capture and archive data for long-term storage
  • Find, retrieve and repurpose information
  • Collaborate electronically with colleagues
  • Seamless integration with existing systems
  • Bridging the documentation and workflow gap between the laboratory and business
  • Vendor-Independent Analytical Data Viewer
  • Compliance-ready environment


  • Request pricing

20. ACD/Labs Data Management and Informatics: Analytical Data Management

ACD Labs Data Management and Informatics dashboard

ACD/Labs Data Management and Informatics support key instrument vendor formats and chromatographic peak structure assignment. Process separations experiments and construct application databases to exchange expert knowledge. Share analyzed data to enhance organizational decision-making. Create a searchable database of lab knowledge.


  • Better collaboration with centralized analytical data management
  • Live analytical data helps scientists make quick, confident conclusions.
  • Standardizes analytical data merges it with scientific context and saves it.
  • Spectrum/chromatogram data interpretation
  • Process and analyze LC/MS, NMR, and other analytical data
  • Add chemistry
  • Database record
  • Notify scientists if revisions are needed.
  • End-user reports
  • Reprocess normalized contextual data for new questions.
  • Mining old data for new value
  • Improved algorithms and visualization can yield new insights.


  • Contact ACD/Labs for pricing

Leverage Scientific Data Management Systems

More Americans are expecting increased funding for research and development, particularly in science and technology. Research companies and academic institutions are responding to this, with their scientists, lab workers, and other STEM professionals leveraging the higher government budget allocation on top of more available grants to expand the world of scientific knowledge and extend technological innovations.

Getting one of the best scientific data management systems is more important now than ever. Managing scientific data and collaboration is now easier with more advanced SDMS made available over the cloud.



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