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Martin C. Frith

Martin C. Frith

D-Index & Metrics

Genetics

D-Index
50
Citations
34609
World Ranking
3888
National Ranking
172

Overview

Martin C. Frith is affiliated with the University of Tokyo in Japan. Their research primarily covers the broad field of Biochemistry, Genetics and Molecular Biology, with a focus on Molecular Biology, Plant Science, Genetics, Artificial Intelligence, and Cellular and Molecular Neuroscience as subfields of study.

Their work spans several main topics, including:

  • RNA and protein synthesis mechanisms
  • Genomics and Phylogenetic Studies
  • Chromosomal and Genetic Variations
  • RNA modifications and cancer
  • Mitochondrial Function and Pathology
  • DNA Repair Mechanisms
  • Algorithms and Data Compression

Martin C. Frith has contributed extensively to scientific literature with notable recent papers such as:

  • "Recombination of repeat elements generates somatic complexity in human genomes," published in 2022 in Cell
  • "Long-read sequencing identifies the pathogenic nucleotide repeat expansion in RFC1 in a Japanese case of CANVAS," published in 2020 in Journal of Human Genetics
  • "A pipeline for complete characterization of complex germline rearrangements from long DNA reads," published in 2020 in Genome Medicine
  • "Minimally overlapping words for sequence similarity search," published in 2020 in Bioinformatics
  • "Significant non-existence of sequences in genomes and proteomes," published in 2021 in Nucleic Acids Research

The scientist frequently collaborates with various colleagues, including:

  • Satomi Mitsuhashi
  • Piero Carninci
  • Giovanni Pascarella
  • Naomichi Matsumoto
  • Annika Busch

Martin C. Frith has published multiple works in prominent venues such as:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Journal of Human Genetics
  • Bioinformatics
  • Nature Communications
  • Molecular Biology and Evolution

Best Publications

  • MEME Suite: tools for motif discovery and searching

    Timothy L. Bailey;Mikael Bodén;Fabian A. Buske;Martin C. Frith

  • The Transcriptional Landscape of the Mammalian Genome

    P. Carninci;T. Kasukawa;S. Katayama;J. Gough

  • A promoter-level mammalian expression atlas

    Alistair R.R. Forrest;Hideya Kawaji;Michael Rehli;J. Kenneth Baillie

  • Antisense Transcription in the Mammalian Transcriptome

    S. Katayama;Y. Tomaru;T. Kasukawa;K. Waki

  • Assessing computational tools for the discovery of transcription factor binding sites.

    Martin Tompa;Nan Li;Timothy L. Bailey;George M. Church

  • Genome-wide analysis of mammalian promoter architecture and evolution

    Piero Carninci;Albin Sandelin;Boris Lenhard;Boris Lenhard;Shintaro Katayama

  • Adaptive seeds tame genomic sequence comparison.

    Szymon M. Kiełbasa;Raymond Wan;Kengo Sato;Paul Horton

  • Rapid evolution of noncoding RNAs: lack of conservation does not mean lack of function

    Ken C. Pang;Ken C. Pang;Martin C. Frith;John S. Mattick

  • Experimental validation of the regulated expression of large numbers of non-coding RNAs from the mouse genome

    Timothy Ravasi;Harukazu Suzuki;Ken C. Pang;Shintaro Katayama

  • Genomic targets of nuclear estrogen receptors.

    Raegan O’Lone;Martin C. Frith;Elinor K. Karlsson;Ulla Hansen

  • Detection of functional DNA motifs via statistical over-representation.

    Martin C. Frith;Yutao Fu;Liqun Yu;Jiang‐Fan Chen

  • Long-read sequencing identifies GGC repeat expansions in NOTCH2NLC associated with neuronal intranuclear inclusion disease.

    Jun Sone;Satomi Mitsuhashi;Atsushi Fujita;Takeshi Mizuguchi

  • Discovering Sequence Motifs with Arbitrary Insertions and Deletions

    Martin C. Frith;Neil F. W. Saunders;Bostjan Kobe;Timothy L. Bailey

  • Cluster-Buster: finding dense clusters of motifs in DNA sequences

    Martin C. Frith;Michael C. Li;Zhiping Weng

  • A code for transcription initiation in mammalian genomes

    Martin C. Frith;Eivind Valen;Anders Krogh;Yoshihide Hayashizaki

  • Detection of cis-element clusters in higher eukaryotic DNA

    Martin C. Frith;Ulla Hansen;Zhiping Weng

  • SeqVISTA: a graphical tool for sequence feature visualization and comparison

    Zhenjun Hu;Martin C. Frith;Tianhua Niu;Zhiping Weng

  • The amazing complexity of the human transcriptome.

    Martin C Frith;Michael Pheasant;John S Mattick

  • The abundance of short proteins in the mammalian proteome

    Martin C. Frith;Alistair Raymond Russell Forrest;Ehsan Nourbakhsh;Ken C. Pang;Ken C. Pang

  • Finding functional sequence elements by multiple local alignment

    Martin C. Frith;Ulla Hansen;John L. Spouge;Zhiping Weng

Frequent Co-Authors

Kiyoshi Asai
Kiyoshi Asai University of Tokyo
Naomichi Matsumoto
Naomichi Matsumoto Yokohama City University
Zhiping Weng
Zhiping Weng University of Massachusetts Chan Medical School
Albin Sandelin
Albin Sandelin University of Copenhagen
Boris Lenhard
Boris Lenhard Imperial College London
Claes Wahlestedt
Claes Wahlestedt University of Miami
Shintaro Katayama
Shintaro Katayama Karolinska Institute

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