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Biology and Biochemistry

D-Index
60
Citations
20273
World Ranking
11713
National Ranking
13

Overview

István Simon is affiliated with the Hungarian Academy of Sciences in Hungary. Their research primarily spans the fields of Biochemistry, Genetics and Molecular Biology as well as Materials Science. Within these broad disciplines, their work addresses subfields including Molecular Biology, Materials Chemistry, Ecology, and Geography, Planning and Development.

The scientist's main research topics focus on Protein Structure and Dynamics, Enzyme Structure and Function, RNA and protein synthesis mechanisms, Nuclear Structure and Function, Cancer-related gene regulation, Advanced biosensing and bioanalysis techniques, and Machine Learning in Materials Science.

István Simon has published extensively, with several recent papers contributing to molecular sciences and related fields. Notable publications include:

  • Macromolecular Interactions of Disordered Proteins, 2020, International Journal of Molecular Sciences
  • MFIB 2.0: a major update of the database of protein complexes formed by mutual folding of the constituting protein chains, 2024, Nucleic Acids Research
  • Origin of Increased Solvent Accessibility of Peptide Bonds in Mutual Synergetic Folding Proteins, 2021, International Journal of Molecular Sciences
  • Molecular Dynamics Simulation as a Tool to Identify Mutual Synergistic Folding Proteins, 2023, International Journal of Molecular Sciences
  • Correction: Cserző et al. The First Quarter Century of the Dense Alignment Surface Transmembrane Prediction Method, 2024, International Journal of Molecular Sciences

Their frequent co-authors include Csaba Magyar, Miklós Cserző, Bálint Zoltán Németh, Birgit Eisenhaber, and Frank Eisenhaber.

István Simon's publications are mostly found in the International Journal of Molecular Sciences, with six articles, followed by contributions to Nucleic Acids Research, Közlekedéstudományi Szemle, and bioRxiv (Cold Spring Harbor Laboratory).

In addition to journal articles, the scientist has a book publication titled Pénzügyi jog II. published in 2020 by Osiris Kiadó eBooks.

Best Publications

  • IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content

    Zsuzsanna Dosztányi;Veronika Csizmok;Peter Tompa;István Simon

  • The HMMTOP transmembrane topology prediction server

    Gábor E. Tusnády;István Simon

  • Principles governing amino acid composition of integral membrane proteins: Application to topology prediction

    Gábor E. Tusnády;István Simon

  • Prediction of transmembrane alpha-helices in prokaryotic membrane proteins: the dense alignment surface method.

    M Cserzö;E Wallin;I Simon;G von Heijne

  • The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins.

    Zsuzsanna Dosztányi;Veronika Csizmók;Péter Tompa;István Simon

  • ANCHOR: web server for predicting protein binding regions in disordered proteins.

    Zsuzsanna Dosztányi;Bálint Mészáros;István Simon

  • Prediction of Protein Binding Regions in Disordered Proteins

    Bálint Mészáros;István Simon;Zsuzsanna Dosztányi

  • Preformed structural elements feature in partner recognition by intrinsically unstructured proteins.

    Monika Fuxreiter;István Simon;Peter Friedrich;Peter Tompa

  • PSORT-B: Improving protein subcellular localization prediction for Gram-negative bacteria.

    Jennifer L. Gardy;Cory Spencer;Ke Wang;Martin Ester

  • Local structural disorder imparts plasticity on linear motifs

    Monika Fuxreiter;Peter Tompa;István Simon

  • Hydrogen exchange and the dynamic structure of proteins.

    C. Woodward;I. Simon;E. Tüchsen

  • Disorder and sequence repeats in hub proteins and their implications for network evolution.

    Zsuzsanna Dosztanyi;Jake Chen;A. Keith Dunker;Istvan Simon

  • PDB_TM: selection and membrane localization of transmembrane proteins in the protein data bank

    Gábor E. Tusnády;Zsuzsanna Dosztányi;István Simon

  • Molecular principles of the interactions of disordered proteins.

    Bálint Mészáros;Peter Tompa;István Simon;Zsuzsanna Dosztányi

  • PDBTM: Protein Data Bank of transmembrane proteins after 8 years

    Dániel Kozma;István Simon;Gábor E. Tusnády

  • Transmembrane proteins in the Protein Data Bank: identification and classification

    Gábor E. Tusnády;Zsuzsanna Dosztányi;István Simon

  • Close encounters of the third kind: Disordered domains and the interactions of proteins

    Peter Tompa;Monika Fuxreiter;Christopher J. Oldfield;Istvan Simon

  • Malleable machines take shape in eukaryotic transcriptional regulation

    Monika Fuxreiter;Peter Tompa;István Simon;Vladimir N Uversky

  • BiSearch: primer-design and search tool for PCR on bisulfite-treated genomes.

    Gábor E. Tusnády;István Simon;András Váradi;Tamás Arányi

  • Stabilization centers in proteins:Identification, characterization and predictions

    Zsuzsanna Dosztányi;András Fiser;István Simon

Frequent Co-Authors

Monika Fuxreiter
Monika Fuxreiter University of Padua
Peter Tompa
Peter Tompa Vrije Universiteit Brussel
Vladimir N. Uversky
Vladimir N. Uversky University of South Florida
A. Keith Dunker
A. Keith Dunker Indiana University
Éva Rajnavölgyi
Éva Rajnavölgyi University of Debrecen
Andras Fiser
Andras Fiser Albert Einstein College of Medicine
M. Michael Gromiha
M. Michael Gromiha Indian Institute of Technology Madras
Harold A. Scheraga
Harold A. Scheraga Cornell University
Christopher J. Oldfield
Christopher J. Oldfield Virginia Commonwealth University
Sándor Pongor
Sándor Pongor Pázmány Péter Catholic University

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