Hong-Yu Ou

Best Publications

• ICEberg 2.0: an updated database of bacterial integrative and conjugative elements.

  Meng Liu;Xiaobin Li;Yingzhou Xie;Dexi Bi

  474
  Citations

• oriTfinder: a web-based tool for the identification of origin of transfers in DNA sequences of bacterial mobile genetic elements.

  Xiaobin Li;Yingzhou Xie;Meng Liu;Cui Tai

  317
  Citations

• TADB: a web-based resource for Type 2 toxin–antitoxin loci in bacteria and archaea

  Yucheng Shao;Ewan M. Harrison;Dexi Bi;Cui Tai

  306
  Citations

• ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria

  Dexi Bi;Zhen Xu;Ewan M. Harrison;Cui Tai

  252
  Citations

• TADB 2.0: an updated database of bacterial type II toxin–antitoxin loci

  Yingzhou Xie;Yiqing Wei;Yue Shen;Xiaobin Li

  247
  Citations

• Complete Genome Sequence of Klebsiella pneumoniae subsp. pneumoniae HS11286, a Multidrug-Resistant Strain Isolated from Human Sputum

  Pinglei Liu;Peng Li;Xiaofei Jiang;Dexi Bi

  227
  Citations

• SecReT6: a web-based resource for type VI secretion systems found in bacteria

  Jun Li;Yufeng Yao;H. Howard Xu;Limin Hao

  199
  Citations

• The Z curve database: a graphic representation of genome sequences.

  Chun-Ting Zhang;Ren Zhang;Hong-Yu Ou

  194
  Citations

• VRprofile2: detection of antibiotic resistance-associated mobilome in bacterial pathogens

  Unknown

  137
  Citations

• SecReT4: a web-based bacterial type IV secretion system resource

  Dexi Bi;Linmeng Liu;Cui Tai;Zixin Deng

  137
  Citations

• Role and Regulation of Fatty Acid Biosynthesis in the Response of Shewanella piezotolerans WP3 to Different Temperatures and Pressures

  Unknown

  136
  Citations

• Complete genome sequence of hypervirulent and outbreak-associated Acinetobacter baumannii strain LAC-4: epidemiology, resistance genetic determinants and potential virulence factors.

  Hong-Yu Ou;Shan N. Kuang;Xinyi He;Brenda M. Molgora

  136
  Citations

• Type VI secretion system contributes to Enterohemorrhagic Escherichia coli virulence by secreting catalase against host reactive oxygen species (ROS).

  Unknown

  135
  Citations

• Mobilization of the nonconjugative virulence plasmid from hypervirulent Klebsiella pneumoniae

  Yanping Xu;Jianfeng Zhang;Meng Wang;Meng Liu

  132
  Citations

• VRprofile: gene-cluster-detection-based profiling of virulence and antibiotic resistance traits encoded within genome sequences of pathogenic bacteria.

  Jun Li;Cui Tai;Zixin Deng;Weihong Zhong

  131
  Citations

• MobilomeFINDER: web-based tools for in silico and experimental discovery of bacterial genomic islands

  Hong-Yu Ou;Xinyi He;Ewan M. Harrison;Bridget R. Kulasekara

  109
  Citations

• Pathogenicity islands PAPI-1 and PAPI-2 contribute individually and synergistically to the virulence of Pseudomonas aeruginosa strain PA14.

  Ewan M. Harrison;Melissa E.K. Carter;Shelley Luck;Hong-Yu Ou

  107
  Citations

• Cleavage of phosphorothioated DNA and methylated DNA by the type IV restriction endonuclease ScoMcrA.

  Guang Liu;Hong-Yu Ou;Tao Wang;Li Li

  105
  Citations

• Genomic analysis and temperature-dependent transcriptome profiles of the rhizosphere originating strain Pseudomonas aeruginosa M18

  Unknown

  103
  Citations

• A novel strategy for the identification of genomic islands by comparative analysis of the contents and contexts of tRNA sites in closely related bacteria

  Hong-Yu Ou;Ling-Ling Chen;James Lonnen;Roy R. Chaudhuri

  102
  Citations