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D-Index & Metrics

Biology and Biochemistry

D-Index
57
Citations
158371
World Ranking
13484
National Ranking
5720

Overview

Gabor T. Marth is affiliated with the University of Utah in the United States and specializes in the fields of Biochemistry, Genetics, and Molecular Biology, with a significant body of work also related to Medicine. Their research spans several subfields, notably Molecular Biology, Genetics, Cancer Research, Oncology, and Epidemiology.

The scientist's work prominently addresses topics such as Cancer Genomics and Diagnostics, Genomics and Rare Diseases, Single-cell and Spatial Transcriptomics, Genomics and Phylogenetic Studies, Chronic Lymphocytic Leukemia Research, Molecular Biology Techniques and Applications, and Genetic factors in colorectal cancer.

Frequent collaborators include:

  • Xiaomeng Huang
  • Aaron R. Quinlan
  • Andrew Farrell
  • Matt Velinder

Key venues where their research has been published encompass:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Genetics in Medicine Open
  • Cancer Research
  • Genome Medicine
  • Scientific Reports

Notable recent publications by Gabor T. Marth include:

  • MYC Drives Temporal Evolution of Small Cell Lung Cancer Subtypes by Reprogramming Neuroendocrine Fate, 2020, Cancer Cell
  • A human breast cancer-derived xenograft and organoid platform for drug discovery and precision oncology, 2022, Nature Cancer
  • Genomic analyses implicate noncoding de novo variants in congenital heart disease, 2020, Nature Genetics
  • Somalier: rapid relatedness estimation for cancer and germline studies using efficient genome sketches, 2020, Genome Medicine
  • Archetype tasks link intratumoral heterogeneity to plasticity and cancer hallmarks in small cell lung cancer, 2022, Cell Systems

Best Publications

  • The Sequence Alignment/Map format and SAMtools

    Heng Li;Bob Handsaker;Alec Wysoker;Tim Fennell

  • A global reference for human genetic variation.

    Adam Auton;Gonçalo R. Abecasis;David M. Altshuler;Richard M. Durbin

  • The variant call format and VCFtools

    Petr Danecek;Adam Auton;Goncalo Abecasis;Cornelis A. Albers

  • An integrated map of genetic variation from 1,092 human genomes

    Goncalo R Abecasis;Adam Auton;Lisa D Brooks

  • Table S2: Trans-factors and trinucleotide repeat instability Trans-factor

    Arturo López Castel;John D Cleary;Christopher E Pearson

  • A map of human genome sequence variation containing 1.42 million single nucleotide polymorphisms

    Ravi Sachidanandam;David Weissman;Steven C. Schmidt;Jerzy M. Kakol

  • Haplotype-based variant detection from short-read sequencing

    Erik Garrison;Gabor Marth

  • An integrated map of structural variation in 2,504 human genomes

    Peter H. Sudmant;Tobias Rausch;Eugene J. Gardner;Robert E. Handsaker;Robert E. Handsaker

  • ART: a next-generation sequencing read simulator

    Weichun Huang;Leping Li;Jason R. Myers;Gabor T. Marth

  • Mapping copy number variation by population-scale genome sequencing

    Ryan E. Mills;Klaudia Walter;Chip Stewart;Robert E. Handsaker

  • BamTools: a C++ API and toolkit for analyzing and managing BAM files.

    Derek W. Barnett;Erik K. Garrison;Aaron R. Quinlan;Michael P. Strömberg

  • Multi-platform discovery of haplotype-resolved structural variation in human genomes

    Mark J.P. Chaisson;Mark J.P. Chaisson;Ashley D. Sanders;Xuefang Zhao;Xuefang Zhao;Ankit Malhotra

  • A global reference for human genetic variation

    Adam Auton;Gonçalo R. Abecasis;David M. Altshuler;Richard M. Durbin

  • Demographic history and rare allele sharing among human populations

    Simon Gravel;Brenna M. Henn;Ryan N. Gutenkunst;Amit R. Indap

  • A general approach to single-nucleotide polymorphism discovery

    Gabor T. Marth;Ian F Korf;Mark D. Yandell;Raymond T. Yeh

  • SpeedSeq: ultra-fast personal genome analysis and interpretation

    Colby Chiang;Ryan M Layer;Gregory G Faust;Michael R Lindberg

  • Whole-genome sequencing and variant discovery in C. elegans.

    La Deana W. Hillier;Gabor T. Marth;Aaron R. Quinlan;David Dooling

  • A map of human genome variation from population-scale sequencing

    Richard M. Durbin;David L. Altshuler;Gonçalo R. Abecasis;David R. Bentley

  • Human Diallelic Insertion/Deletion Polymorphisms

    James L. Weber;Donna David;Jeremy Heil;Ying Fan

  • Integrative Annotation of Variants from 1092 Humans: Application to Cancer Genomics

    Ekta Khurana;Yao Fu;Vincenza Colonna;Vincenza Colonna;Xinmeng Jasmine Mu

Frequent Co-Authors

Aaron R. Quinlan
Aaron R. Quinlan University of Utah
Robert E. Handsaker
Robert E. Handsaker Harvard University
Erik Garrison
Erik Garrison University of Tennessee Health Science Center
Steven A. McCarroll
Steven A. McCarroll Harvard University
Paul Flicek
Paul Flicek The Jackson Laboratory
Richard A. Gibbs
Richard A. Gibbs Baylor College of Medicine
Mark J. Daly
Mark J. Daly Massachusetts General Hospital
Richard Durbin
Richard Durbin University of Cambridge
Laura Clarke
Laura Clarke European Bioinformatics Institute
Donna M. Muzny
Donna M. Muzny Baylor College of Medicine

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