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Genetics

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64
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22446
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2758
National Ranking
1213

Overview

Fumiaki Katagiri is a researcher affiliated with the University of Minnesota in the United States, focusing on plant science within the broader fields of agricultural and biological sciences as well as biochemistry, genetics, and molecular biology. Their work concentrates on various aspects of plant biology, including plant-microbe interactions, plant parasitism and resistance, and plant stress responses and tolerance.

Katagiri's published research spans several key topics:

  • Plant-Microbe Interactions and Immunity
  • Plant Parasitism and Resistance
  • Plant Pathogenic Bacteria Studies
  • Plant Stress Responses and Tolerance
  • Evolution and Genetic Dynamics
  • Bioinformatics and Genomic Networks
  • Soybean genetics and cultivation

Among the recent papers attributed to Katagiri, the following works stand out:

  • Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental Stresses, 2021, UNC Libraries
  • Pathogen-driven coevolution across the CBP60 plant immune regulator subfamilies confers resilience on the regulator module, 2021, New Phytologist
  • Letter to the Editor: DNA Purification-Free PCR from Plant Tissues, 2021, Plant and Cell Physiology
  • Variation in shoot architecture traits and their relationship to canopy coverage and light interception in soybean (Glycine max), 2024, BMC Plant Biology
  • Decomposition of dynamic transcriptomic responses during effector-triggered immunity reveals conserved responses in two distinct plant cell populations, 2024, Plant Communications

Katagiri commonly collaborates with several frequent co-authors, including:

  • Kenichi Tsuda
  • Kunqi Hong
  • Xiaotong Liu
  • Daisuke Igarashi
  • Rachel Hillmer

The scientist has contributed extensively to journals and publication venues specializing in biology and plant sciences. The main venues with multiple publications by Katagiri include:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • UNC Libraries
  • New Phytologist
  • BMC Plant Biology
  • Plant and Cell Physiology

Katagiri's research subfields mainly cover:

  • Plant Science
  • Molecular Biology
  • Genetics
  • Agronomy and Crop Science
  • Cell Biology

This body of work situates Fumiaki Katagiri within a scientific context that addresses fundamental questions in plant immunity, genetic regulation, and crop trait improvement, with particular attention to transcriptomic responses and coevolutionary dynamics in plants under environmental stress and pathogenic challenge.

Best Publications

  • A draft sequence of the rice genome (Oryza sativa L. ssp indica)

    Stephen A. Goff;Darrell Ricke;Tien-Hung Lan;Gernot Presting

  • Expression Profile Matrix of Arabidopsis Transcription Factor Genes Suggests Their Putative Functions in Response to Environmental Stresses

    Wenqiong Chen;Nicholas J. Provart;Jane Glazebrook;Fumiaki Katagiri

  • A High-Throughput Arabidopsis Reverse Genetics System

    Allen Sessions;Ellen Burke;Gernot Presting;George Aux

  • Comparing signaling mechanisms engaged in pattern-triggered and effector-triggered immunity

    Kenichi Tsuda;Fumiaki Katagiri

  • The A. thaliana disease resistance gene RPS2 encodes a protein containing a nucleotide-binding site and leucine-rich repeats

    Michael Mindrinos;Fumiaki Katagiri;Guo Liang Yu;Frederick M. Ausubel

  • Quantitative Nature of Arabidopsis Responses during Compatible and Incompatible Interactions with the Bacterial Pathogen Pseudomonas syringae

    Yi Tao;Yi Tao;Zhiyi Xie;Wenqiong Chen;Jane Glazebrook

  • Network properties of robust immunity in plants.

    Kenichi Tsuda;Masanao Sato;Masanao Sato;Thomas Stoddard;Jane Glazebrook

  • The Arabidopsis Thaliana-Pseudomonas Syringae Interaction

    Fumiaki Katagiri;Roger Thilmony;Sheng Yang He

  • Topology of the network integrating salicylate and jasmonate signal transduction derived from global expression phenotyping.

    Jane Glazebrook;Wenqiong Chen;Bram Estes;Hur Song Chang

  • Arabidopsis lysin-motif proteins LYM1 LYM3 CERK1 mediate bacterial peptidoglycan sensing and immunity to bacterial infection

    Roland Willmann;Heini M. Lajunen;Gitte Erbs;Mari Anne Newman

  • Two tobacco DNA-binding proteins with homology to the nuclear factor CREB

    Fumiaki Katagiri;Eric Lam;Nam Hai Chua

  • Eukaryotic Fatty Acylation Drives Plasma Membrane Targeting and Enhances Function of Several Type III Effector Proteins from Pseudomonas syringae

    Zachary L Nimchuk;Eric Marois;Susanne Kjemtrup;R. Todd Leister

  • Interplay between MAMP-triggered and SA-mediated defense responses.

    Kenichi Tsuda;Masanao Sato;Masanao Sato;Jane Glazebrook;Jerry D. Cohen

  • Arabidopsis CaM Binding Protein CBP60g Contributes to MAMP-Induced SA Accumulation and Is Involved in Disease Resistance against Pseudomonas syringae

    Lin Wang;Kenichi Tsuda;Masanao Sato;Masanao Sato;Jerry D. Cohen

  • CBP60g and SARD1 play partially redundant critical roles in salicylic acid signaling

    Lin Wang;Kenichi Tsuda;William Truman;Masanao Sato;Masanao Sato

  • Understanding the Plant Immune System

    Fumiaki Katagiri;Kenichi Tsuda

  • BR-SIGNALING KINASE1 physically associates with FLAGELLIN SENSING2 and regulates plant innate immunity in Arabidopsis.

    Hua Shi;Qiujing Shen;Yiping Qi;Haojie Yan

  • Dual Regulation of Gene Expression Mediated by Extended MAPK Activation and Salicylic Acid Contributes to Robust Innate Immunity in Arabidopsis thaliana

    Kenichi Tsuda;Akira Mine;Gerit Bethke;Daisuke Igarashi

  • Mutational Analysis of the Arabidopsis Nucleotide Binding Site–Leucine-Rich Repeat Resistance Gene RPS2

    Yi Tao;Yi Tao;Yi Tao;Fenghua Yuan;R. Todd Leister;Frederick M. Ausubel

  • Molecular recognition of pathogen attack occurs inside of plant cells in plant disease resistance specified by the Arabidopsis genes RPS2 and RPM1

    R. Todd Leister;Frederick M. Ausubel;Fumiaki Katagiri;Fumiaki Katagiri

Frequent Co-Authors

Jane Glazebrook
Jane Glazebrook University of Minnesota
Kenichi Tsuda
Kenichi Tsuda Huazhong Agricultural University
Frederick M. Ausubel
Frederick M. Ausubel Harvard University
Michael N. Mindrinos
Michael N. Mindrinos Stanford University
Andrew F. Bent
Andrew F. Bent University of Wisconsin–Madison
Brian J. Staskawicz
Brian J. Staskawicz University of California, Berkeley
Nam-Hai Chua
Nam-Hai Chua National University of Singapore
Douglas Dahlbeck
Douglas Dahlbeck University of California, Berkeley
Tong Zhu
Tong Zhu Research Triangle Park Foundation
Steven P. Briggs
Steven P. Briggs University of California, San Diego

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