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David L. Beveridge

David L. Beveridge

D-Index & Metrics

Chemistry

D-Index
64
Citations
21701
World Ranking
7915
National Ranking
2296

Overview

David L. Beveridge is affiliated with Wesleyan University in the United States. Their research primarily focuses on Biochemistry, Genetics, and Molecular Biology, with a significant emphasis on Molecular Biology. Additional fields of study include Medicine, covering aspects such as Pathology and Forensic Medicine, Endocrinology, Diabetes and Metabolism, Reproductive Medicine, and Computational Theory and Mathematics.

The scientist's work addresses diverse main topics, including:

  • RNA and protein synthesis mechanisms
  • DNA repair mechanisms
  • Protein structure and dynamics
  • Genetic factors in colorectal cancer
  • Hormonal and reproductive studies
  • Hypothalamic control of reproductive hormones
  • Receptor mechanisms and signaling

Recent publications by David L. Beveridge include:

  • Estradiol induces allosteric coupling and partitioning of sex-hormone-binding globulin monomers among conformational states, 2021, published in iScience
  • Molecular dynamics of mismatch detection-How MutS uses indirect readout to find errors in DNA, 2023, published in Biophysical Journal
  • Allosteric Signaling in PDZ Energetic Networks: Embedding Error Analysis, 2023, published in The Journal of Physical Chemistry B
  • High Energy Channeling and Malleable Transition States: Molecular Dynamics Simulations and Free Energy Landscapes for the Thermal Unfolding of Protein U1A and 13 Mutants, 2022, published in Biomolecules
  • Investigating the Role of Msh4-Msh5 ATPASE Activity During Homologous Recombination, 2020, published in Biophysical Journal

Frequent coauthors of David L. Beveridge include:

  • Kelly M. Thayer
  • Manju Hingorani
  • Abhilash Jayaraj
  • Zane Lombardo
  • Bharat Lakhani

The scientist's work is frequently published in the following venues:

  • Biophysical Journal
  • iScience
  • The Journal of Physical Chemistry B
  • Biomolecules

Best Publications

  • Approximate molecular orbital theory

    John A. Pople;David L. Beveridge

  • Approximate Self‐Consistent Molecular‐Orbital Theory. V. Intermediate Neglect of Differential Overlap

    J. A. Pople;D. L. Beveridge;P. A. Dobosh

  • The nucleic acid database. A comprehensive relational database of three-dimensional structures of nucleic acids

    H.M. Berman;W.K. Olson;D.L. Beveridge;J. Westbrook

  • Molecular orbital theory of the electronic structure of organic compounds. II. Spin densities in paramagnetic species

    J. A. Pople;David L. Beveridge;Paul A. Dobosh

  • Intrusion of Counterions into the Spine of Hydration in the Minor Groove of B-DNA: Fractional Occupancy of Electronegative Pockets

    Matthew A. Young;B. Jayaram;D. L. Beveridge

  • A systematic molecular dynamics study of nearest-neighbor effects on base pair and base pair step conformations and fluctuations in B-DNA

    Richard Lavery;Krystyna Zakrzewska;David Beveridge;Thomas C. Bishop

  • Solvation Free Energy of Biomacromolecules: Parameters for a Modified Generalized Born Model Consistent with the AMBER Force Field

    B. Jayaram;D. Sprous;D. L. Beveridge

  • Molecular Dynamics Simulations of the 136 Unique Tetranucleotide Sequences of DNA Oligonucleotides. II: Sequence Context Effects on the Dynamical Structures of the 10 Unique Dinucleotide Steps

    Surjit B. Dixit;David L. Beveridge;David A. Case;Thomas E. Cheatham

  • Molecular Dynamics Simulations of the 136 Unique Tetranucleotide Sequences of DNA Oligonucleotides. I. Research Design and Results on d(CpG) Steps

    David L. Beveridge;Gabriela Barreiro;K. Suzie Byun;David A. Case

  • Conformational and Helicoidal Analysis of 30 PS of Molecular Dynamics on the d(CGCGAATTCGCG) Double Helix: “Curves”, Dials and Windows

    G. Ravishanker;S. Swaminathan;D. L. Beveridge;R. Lavery

  • Monte Carlo studies of the structure of dilute aqueous sclutions of Li+, Na+, K+, F−, and Cl−

    Mihaly Mezei;David L. Beveridge

  • Theoretical studies of hydrogen bonding in liquid water and dilute aqueous solutions

    Mihaly Mezei;David L. Beveridge

  • Monte Carlo studies on the structure of a dilute aqueous solution of methane

    S. Swaminathan;S. W. Harrison;David L. Beveridge

  • Ion motions in molecular dynamics simulations on DNA

    Sergei Y. Ponomarev;Kelly M. Thayer;David L. Beveridge

  • μABC: a systematic microsecond molecular dynamics study of tetranucleotide sequence effects in B-DNA

    Marco Pasi;John H. Maddocks;David Beveridge;Thomas C. Bishop

  • Free Energy Analysis of the Conformational Preferences of A and B Forms of DNA in Solution

    B. Jayaram;D. Sprous;M. A. Young;D. L. Beveridge

  • Monte Carlo determination of the free energy and internal energy of hydration for the Ala dipeptide at 25.degree.C

    M. Mezei;P. K. Mehrotra;D. L. Beveridge

  • Structural analysis of molecular solutions based on quasi-component distribution functions. Application to [H2CO]aq at 25.degree.C

    P. K. Mehrotra;David L. Beveridge

  • Free energy of a charge distribution in concentric dielectric continua

    David L. Beveridge;Gary W. Schnuelle

  • Local dielectric environment of B-DNA in solution : Results from a 14 ns molecular dynamics trajectory

    M. A. Young;B. Jayaram;D. L. Beveridge

Frequent Co-Authors

Bhyravabhotla Jayaram
Bhyravabhotla Jayaram Indian Institute of Technology Delhi
Richard Lavery
Richard Lavery Claude Bernard University Lyon 1
Thomas E. Cheatham
Thomas E. Cheatham University of Utah
Helen M. Berman
Helen M. Berman Rutgers, The State University of New Jersey
David A. Case
David A. Case Rutgers, The State University of New Jersey
John H. Maddocks
John H. Maddocks École Polytechnique Fédérale de Lausanne
Wilma K. Olson
Wilma K. Olson Rutgers, The State University of New Jersey
Gabor Tigyi
Gabor Tigyi University of Tennessee Health Science Center
Dietmar J. Manstein
Dietmar J. Manstein Hannover Medical School
Christoph Schick
Christoph Schick University of Rostock

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