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Iñaki Ruiz-Trillo

Iñaki Ruiz-Trillo

D-Index & Metrics

Genetics

D-Index
52
Citations
9006
World Ranking
3803
National Ranking
71

Research.com Recognitions

  • Member of the European Molecular Biology Organization (EMBO)
  • Member of the European Molecular Biology Organization (EMBO)

Overview

Iñaki Ruiz-Trillo is affiliated with Pompeu Fabra University in Spain and has a scholarly focus in the fields of Biochemistry, Genetics and Molecular Biology, as well as Environmental Science. Within these broad areas, their work primarily engages with Molecular Biology, Ecology, Cellular and Molecular Neuroscience, Global and Planetary Change, and Cell Biology.

Their research topics cover a range of specialized subjects including Protist diversity and phylogeny, Microbial Community Ecology and Physiology, Genomics and Phylogenetic Studies, Environmental DNA in Biodiversity Studies, Marine Ecology and Invasive Species, RNA and protein synthesis mechanisms, and RNA Research and Splicing.

Among recent papers, notable publications include:

  • Genetic tool development in marine protists: emerging model organisms for experimental cell biology (2020, Nature Methods)
  • The origin of animals: an ancestral reconstruction of the unicellular-to-multicellular transition (2021, Open Biology)
  • Divergent genomic trajectories predate the origin of animals and fungi (2022, Nature)
  • A phylogenetic and proteomic reconstruction of eukaryotic chromatin evolution (2022, Nature Ecology & Evolution)
  • On the origin and evolution of RNA editing in metazoans (2023, Cell Reports)

The scientist's frequent co-authors include Elena Casacuberta, Meritxell Antó, Sebastián R. Najle, Michelle M. Leger, and Victoria Shabardina. These collaborations have contributed to the breadth and depth of their research outputs.

Common publication venues for their work are:

  • bioRxiv (Cold Spring Harbor Laboratory)
  • Genome Biology and Evolution
  • Open Biology
  • Current Biology
  • Nature Methods

Iñaki Ruiz-Trillo is a member of the European Molecular Biology Organization (EMBO), indicating recognition by a prominent scientific community in molecular biology.

Best Publications

  • Acoel flatworms : Earliest extant bilaterian metazoans, not members of Platyhelminthes

    Iñaki Ruiz-Trillo;Marta Riutort;D. Timothy J. Littlewood;Elisabeth A. Herniou

  • The origin of Metazoa: a unicellular perspective

    Arnau Sebé-Pedrós;Bernard M. Degnan;Iñaki Ruiz-Trillo

  • The Capsaspora genome reveals a complex unicellular prehistory of animals

    Hiroshi Suga;Zehua Chen;Alex de Mendoza;Arnau Sebé-Pedrós

  • A Phylogenomic Investigation into the Origin of Metazoa

    Iñaki Ruiz-Trillo;Iñaki Ruiz-Trillo;Andrew J. Roger;Gertraud Burger;Michael W. Gray

  • Ancient origin of the integrin-mediated adhesion and signaling machinery

    Arnau Sebé-Pedrós;Andrew J. Roger;Franz B. Lang;Nicole King

  • Transcription factor evolution in eukaryotes and the assembly of the regulatory toolkit in multicellular lineages

    Alex de Mendoza;Arnau Sebé-Pedrós;Arnau Sebé-Pedrós;Martin Sebastijan Šestak;Marija Matejčić

  • A phylogenetic analysis of myosin heavy chain type II sequences corroborates that Acoela and Nemertodermatida are basal bilaterians

    Iñaki Ruiz-Trillo;Jordi Paps;Mercè Loukota;Carles Ribera

  • Unexpected Repertoire of Metazoan Transcription Factors in the Unicellular Holozoan Capsaspora owczarzaki

    Arnau Sebé-Pedrós;Alex de Mendoza;B. Franz Lang;Bernard M. Degnan

  • Phylogenomics Reveals Convergent Evolution of Lifestyles in Close Relatives of Animals and Fungi

    Guifré Torruella;Guifré Torruella;Alex de Mendoza;Alex de Mendoza;Xavier Grau-Bové;Xavier Grau-Bové;Meritxell Antó

  • The others: our biased perspective of eukaryotic genomes

    Javier del Campo;Javier del Campo;Michael E. Sieracki;Robert Molestina;Patrick Keeling

  • The origins of multicellularity: a multi-taxon genome initiative

    Iñaki Ruiz-Trillo;Gertraud Burger;Peter W.H. Holland;Nicole King

  • The Nemertodermatida are basal bilaterians and not members of the Platyhelminthes

    Ulf Jondelius;Iñaki Ruiz‐Trillo;Jaume Baguñà;Marta Riutort

  • Phylogenetic Relationships within the Opisthokonta Based on Phylogenomic Analyses of Conserved Single-Copy Protein Domains

    Guifré Torruella;Romain Derelle;Jordi Paps;Jordi Paps;B. Franz Lang

  • The Dynamic Regulatory Genome of Capsaspora and the Origin of Animal Multicellularity.

    Arnau Sebé-Pedrós;Cecilia Ballaré;Helena Parra-Acero;Cristina Chiva

  • The Evolution of the GPCR Signaling System in Eukaryotes: Modularity, Conservation, and the Transition to Metazoan Multicellularity

    Alex de Mendoza;Arnau Sebé-Pedrós;Arnau Sebé-Pedrós;Iñaki Ruiz-Trillo;Iñaki Ruiz-Trillo;Iñaki Ruiz-Trillo

  • Regulated aggregative multicellularity in a close unicellular relative of metazoa

    Arnau Sebé-Pedrós;Arnau Sebé-Pedrós;Manuel Irimia;Javier del Campo;Helena Parra-Acero

  • Genetic tool development in marine protists: emerging model organisms for experimental cell biology

    Drahomíra Faktorová;R. Ellen R. Nisbet;R. Ellen R. Nisbet;José A. Fernández Robledo;Elena Casacuberta

  • Dynamics of genomic innovation in the unicellular ancestry of animals

    Xavier Grau-Bové;Xavier Grau-Bové;Guifré Torruella;Stuart Donachie;Hiroshi Suga

  • Evolution and Classification of Myosins, a Paneukaryotic Whole-Genome Approach

    Arnau Sebé-Pedrós;Xavier Grau-Bové;Xavier Grau-Bové;Thomas A. Richards;Thomas A. Richards;Iñaki Ruiz-Trillo;Iñaki Ruiz-Trillo;Iñaki Ruiz-Trillo

  • Premetazoan Origin of the Hippo Signaling Pathway

    Arnau Sebé-Pedrós;Yonggang Zheng;Iñaki Ruiz-Trillo;Iñaki Ruiz-Trillo;Duojia Pan;Duojia Pan

Frequent Co-Authors

Andrew J. Roger
Andrew J. Roger Dalhousie University
Marta Riutort
Marta Riutort University of Barcelona
Manuel Irimia
Manuel Irimia Pompeu Fabra University
Jaume Baguñà
Jaume Baguñà University of Barcelona
Thomas A. Richards
Thomas A. Richards University of Oxford
B. Franz Lang
B. Franz Lang University of Montreal
Nicole King
Nicole King University of California, Berkeley
Ramon Massana
Ramon Massana Spanish National Research Council
Gertraud Burger
Gertraud Burger University of Montreal
Patrick J. Keeling
Patrick J. Keeling University of British Columbia

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