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Overview

Rui Zhao is affiliated with the Environmental Molecular Sciences Laboratory in the United States. Their research portfolio spans multiple fields, focusing primarily on Earth and Planetary Sciences with a substantial number of publications in related subfields.

The main fields of study include:

  • Earth and Planetary Sciences

Within this broad field, their work covers several specific subfields, such as:

  • Geophysics
  • Environmental Chemistry
  • Astronomy and Astrophysics
  • Molecular Biology
  • Oceanography

The topics explored in Rui Zhao's research reflect a strong focus on geophysical phenomena and planetary science dynamics. These topics include:

  • Seismic Waves and Analysis
  • Earthquake Detection and Analysis
  • Methane Hydrates and Related Phenomena
  • Ionosphere and Magnetosphere Dynamics
  • Geophysics and Gravity Measurements
  • Superconducting Materials and Applications
  • Solar and Space Plasma Dynamics

Rui Zhao's publication record includes several peer-reviewed papers in well-known scientific journals. Some of the recent publications are:

  • An Improved Boosting to Amplify Signal with Isobaric Labeling (iBASIL) Strategy for Precise Quantitative Single-cell Proteomics, 2020, Molecular & Cellular Proteomics
  • DEAH-Box RNA Helicases in Pre-mRNA Splicing, 2020, Trends in Biochemical Sciences
  • A streamlined tandem tip-based workflow for sensitive nanoscale phosphoproteomics, 2023, Communications Biology
  • Hanging drop sample preparation improves sensitivity of spatial proteomics, 2022, Lab on a Chip
  • Structure, dynamics and function of the evolutionarily changing biliverdin reductase B family, 2020, The Journal of Biochemistry

Frequent collaborators in Rui Zhao's research include:

  • Tujin Shi
  • Matthew Monroe
  • Marina Gritsenko
  • Vladislav Petyuk
  • Ron Moore

The primary venues for Rui Zhao's research publications reflect a diversity in scientific disciplines and include:

  • OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)
  • RNA
  • Molecular & Cellular Proteomics
  • Trends in Biochemical Sciences
  • Communications Biology

Best Publications

  • Nanodroplet processing platform for deep and quantitative proteome profiling of 10-100 mammalian cells.

    Ying Zhu;Paul D. Piehowski;Rui Zhao;Jing Chen

  • Reproducible workflow for multiplexed deep-scale proteome and phosphoproteome analysis of tumor tissues by liquid chromatography-mass spectrometry

    Philipp Mertins;Philipp Mertins;Lauren C. Tang;Karsten Krug;David J. Clark

  • Global analysis of the Deinococcus radiodurans proteome by using accurate mass tags.

    Mary S. Lipton;Ljiljana Paša-Tolić;Gordon A. Anderson;David J. Anderson

  • Temporal proteome and lipidome profiles reveal hepatitis C virus-associated reprogramming of hepatocellular metabolism and bioenergetics.

    Deborah L. Diamond;Andrew J. Syder;Jon M. Jacobs;Christina M. Sorensen

  • High-efficiency nanoscale liquid chromatography coupled on-line with mass spectrometry using nanoelectrospray ionization for proteomics.

    Yufeng Shen;Rui Zhao;Scott J. Berger;Gordon A. Anderson

  • Use of artificial neural networks for the accurate prediction of peptide liquid chromatography elution times in proteome analyses.

    Konstantinos Petritis;Lars J. Kangas;Patrick L. Ferguson;Gordon A. Anderson

  • Automated 20 kpsi RPLC-MS and MS/MS with Chromatographic Peak Capacities of 1000−1500 and Capabilities in Proteomics and Metabolomics

    Yufeng Shen;Rui Zhang;Ronald J. Moore;Jeongkwon Kim

  • Packed Capillary Reversed-Phase Liquid Chromatography with High-Performance Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry for Proteomics

    Yufeng Shen;Rui Zhao;Mikhail E. Belov;Thomas P. Conrads

  • High-Throughput Proteomics Using High-Efficiency Multiple-Capillary Liquid Chromatography with On-Line High-Performance ESI FTICR Mass Spectrometry

    Yufeng Shen;Nikola Tolic;Rui Zhao;Ljiljana Pasa-Tolic

  • Proteomic Analysis of Single Mammalian Cells Enabled by Microfluidic Nanodroplet Sample Preparation and Ultrasensitive NanoLC‐MS

    Ying Zhu;Geremy Clair;William B. Chrisler;Yufeng Shen

  • Antibody-free, targeted mass-spectrometric approach for quantification of proteins at low picogram per milliliter levels in human plasma/serum

    Tujin Shi;Thomas L. Fillmore;Xuefei Sun;Rui Zhao

  • Ultrasensitive proteomics using high-efficiency on-line micro-SPE-nanoLC-nanoESI MS and MS/MS.

    Yufeng Shen;Nikola Tolic;Christophe D. Masselon;Liljiana Pasa-Tolic

  • Direct mass spectrometric analysis of intact proteins of the yeast large ribosomal subunit using capillary LC/FTICR

    Sang Won Lee;Scott J. Berger;Scott J. Berger;Suzana Martinović;Ljiljana Paša-Tolić

  • High-Throughput Single Cell Proteomics Enabled by Multiplex Isobaric Labeling in a Nanodroplet Sample Preparation Platform

    Maowei Dou;Geremy Clair;Chia-Feng Tsai;Kerui Xu

  • Preparation of 20-μm-i.d. Silica-Based Monolithic Columns and Their Performance for Proteomics Analyses

    Quanzhou Luo;Yufeng Shen;Kim K. Hixson;Rui Zhao

  • Fully automated four-column capillary LC-MS system for maximizing throughput in proteomic analyses.

    Eric A. Livesay;Keqi Tang;Beverley K. Taylor;Michael A. Buschbach

  • Improved Single-Cell Proteome Coverage Using Narrow-Bore Packed NanoLC Columns and Ultrasensitive Mass Spectrometry.

    Yongzheng Cong;Yiran Liang;Khatereh Motamedchaboki;Romain Huguet

  • An Improved Boosting to Amplify Signal with Isobaric Labeling (iBASIL) Strategy for Precise Quantitative Single-cell Proteomics.

    Chia-Feng Tsai;Rui Zhao;Sarah M. Williams;Ronald J. Moore

  • High-Efficiency On-Line Solid-Phase Extraction Coupling to 15−150-μm-i.d. Column Liquid Chromatography for Proteomic Analysis

    Yufeng Shen;Ronald J. Moore;Rui Zhao;Josip Blonder

  • Effectiveness of CID, HCD, and ETD with FT MS/MS for degradomic-peptidomic analysis: comparison of peptide identification methods.

    Yufeng Shen;Nikola Tolić;Fang Xie;Rui Zhao

Frequent Co-Authors

Richard D. Smith
Richard D. Smith Pacific Northwest National Laboratory
Ronald J. Moore
Ronald J. Moore Pacific Northwest National Laboratory
Ljiljana Paša-Tolić
Ljiljana Paša-Tolić Environmental Molecular Sciences Laboratory
Yufeng Shen
Yufeng Shen Columbia University
David G. Camp
David G. Camp Pacific Northwest National Laboratory
Tao Liu
Tao Liu Pacific Northwest National Laboratory
Karin D. Rodland
Karin D. Rodland Pacific Northwest National Laboratory
Ryan T. Kelly
Ryan T. Kelly Brigham Young University
Wei-Jun Qian
Wei-Jun Qian Pacific Northwest National Laboratory
Marina A. Gritsenko
Marina A. Gritsenko Pacific Northwest National Laboratory

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