Anne de Jong

Best Publications

• Identification of Differentially Expressed Genes during Bacillus subtilis Spore Outgrowth in High-Salinity Environments Using RNA Sequencing.

  Katja Nagler;Antonina O Krawczyk;Anne De Jong;Kazimierz Madela

  1340
  Citations

• The Relationship among Tyrosine Decarboxylase and Agmatine Deiminase Pathways in Enterococcus faecalis

  Marta Perez;Victor Ladero;Beatriz del Rio;Begona Redruello

  1185
  Citations

• BAGEL4: a user-friendly web server to thoroughly mine RiPPs and bacteriocins

  Auke J van Heel;Anne de Jong;Chunxu Song;Jakob H Viel

  1026
  Citations

• Comparative Transcriptomics of Bacillus mycoides Strains in Response to Potato-Root Exudates Reveals Different Genetic Adaptation of Endophytic and Soil Isolates

  Yanglei Yi;Anne de Jong;Elrike Frenzel;Oscar P. Kuipers

  967
  Citations

• BAGEL3: Automated identification of genes encoding bacteriocins and (non-)bactericidal posttranslationally modified peptides.

  Auke J. van Heel;Anne de Jong;Manuel Montalbán-López;Jan Kok

  552
  Citations

• Mapping the Pathways to Staphylococcal Pathogenesis by Comparative Secretomics

  M. J. J. B. Sibbald;A. K. Ziebandt;S. Engelmann;M. Hecker

  380
  Citations

• Adaptation of Hansenula polymorpha to methanol: a transcriptome analysis

  Tim van Zutphen;Richard J S Baerends;Kim A Susanna;Anne de Jong

  349
  Citations

• BAGEL: a web-based bacteriocin genome mining tool

  Anne de Jong;Sacha A. F. T. van Hijum;Jetta J. E. Bijlsma;Jan Kok

  321
  Citations

• Signal peptidase I of Bacillus subtilis: patterns of conserved amino acids in prokaryotic and eukaryotic type I signal peptidases.

  J.M. van Dijl;A. de Jong;J. Vehmaanperä;G. Venema

  209
  Citations

• PePPER: a webserver for prediction of prokaryote promoter elements and regulons

  Anne de Jong;Hilco Pietersma;Martijn Cordes;Oscar P Kuipers

  192
  Citations

• BAGEL2: mining for bacteriocins in genomic data

  Anne de Jong;Auke J. van Heel;Jan Kok;Oscar P. Kuipers

  185
  Citations

• CodY of Streptococcus pneumoniae: Link between Nutritional Gene Regulation and Colonization

  Wouter T. Hendriksen;Hester J. Bootsma;Silvia Estevão;Theo Hoogenboezem

  171
  Citations

• Evaluation of bottlenecks in the late stages of protein secretion in Bacillus subtilis

  Albert Bolhuis;Harold Tjalsma;Hilde E. Smith;Anne de Jong

  169
  Citations

• A generally applicable validation scheme for the assessment of factors involved in reproducibility and quality of DNA-microarray data.

  Sacha A.F.T. Van Hijum;Anne De Jong;Richard J.S. Baerends;Harma A. Karsens

  163
  Citations

• A novel scheme to assess factors involved in the reproducibility of DNA-microarray data

  Sacha A.F.T. van Hijum;Anne de Jong;Richard J.S. Baerends;Harma A. Karsens

  137
  Citations

• Identification of the Potential Active Site of the Signal Peptidase SipS of Bacillus subtilis STRUCTURAL AND FUNCTIONAL SIMILARITIES WITH LexA-LIKE PROTEASES

  Jan Maarten van Dijl;Anne de Jong;Gerard Venema;Sierd Bron

  135
  Citations

• LmrCD is a major multidrug resistance transporter in Lactococcus lactis

  Jacek Lubelski;Anne de Jong;Ronald van Merkerk;Herfita Agustiandari

  127
  Citations

• Genome2D: a visualization tool for the rapid analysis of bacterial transcriptome data.

  Richard J.S. Baerends;Wiep Klaas Smits;Anne de Jong;Leendert W. Hamoen;Leendert W. Hamoen

  126
  Citations

• The endogenous Bacillus subtilis (natto) plasmids pTA1015 and pTA1040 contain signal peptidase‐encoding genes: identification of a new structural module on cryptic plasmids

  Wjj Meijer;A Dejong;G Bea;A Wisman

  115
  Citations

• Bacillus subtilis can modulate its capacity and specificity for protein secretion through temporally controlled expression of the sipS gene for signal peptidase I

  Albert Bolhuis;Alexei Sorokin;Vasco Azevedo;S. Dusko Ehrlich

  109
  Citations