Animal Microbiome

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Top Publications

• Metagenomics reveals differences in microbial composition and metabolic functions in the rumen of dairy cows with different residual feed intake

  (2022)
  116 Citations

• Hydrogen and formate production and utilisation in the rumen and the human colon

  (2022)
  72 Citations

• Inoculation with rumen fluid in early life accelerates the rumen microbial development and favours the weaning process in goats.

  Juan Manuel Palma-Hidalgo;Elisabeth Jiménez;Milka Popova;Diego Pablo Morgavi

  (2021)
  71 Citations

• Host metabolome and faecal microbiome shows potential interactions impacted by age and weaning times in calves

  (2023)
  68 Citations

• Evolution of rumen and oral microbiota in calves is influenced by age and time of weaning.

  Nida Amin;Sarah Schwarzkopf;Asako Kinoshita;Asako Kinoshita;Johanna Tröscher-Mußotter

  (2021)
  64 Citations

• Modulation of Atlantic salmon (Salmo salar) gut microbiota composition and predicted metabolic capacity by feeding diets with processed black soldier fly (Hermetia illucens) larvae meals and fractions

  (2022)
  62 Citations

• Gut eukaryotic communities in pigs: diversity, composition and host genetics contribution.

  Yuliaxis Ramayo-Caldas;Francesc Prenafeta-Boldú;Laura M. Zingaretti;Olga Gonzalez-Rodriguez

  (2020)
  59 Citations

• Environmentally enriched housing conditions affect pig welfare, immune system and gut microbiota in early life.

  Caifang Wen;Ingrid van Dixhoorn;Dirkjan Schokker;Henri Woelders

  (2021)
  57 Citations

• Multi-kingdom characterization of the core equine fecal microbiota based on multiple equine (sub)species

  J. E. Edwards;S. A. Shetty;P. van den Berg;F. Burden

  (2020)
  55 Citations

• The porcine respiratory microbiome: recent insights and future challenges.

  Mattia Pirolo;Mattia Pirolo;Carmen Espinosa-Gongora;Debby Bogaert;Luca Guardabassi;Luca Guardabassi

  (2021)
  52 Citations

• An insight into the commercial piglet’s microbial gut colonization: from birth towards weaning

  (2022)
  49 Citations

• Interrogating the bovine reproductive tract metagenomes using culture-independent approaches: a systematic review.

  Chian Teng Ong;Conny Turni;Patrick J. Blackall;Gry Boe-Hansen

  (2021)
  49 Citations

• Composition and co-occurrence patterns of the microbiota of different niches of the bovine mammary gland: potential associations with mastitis susceptibility, udder inflammation, and teat-end hyperkeratosis.

  Hooman Derakhshani;Hooman Derakhshani;Jan C. Plaizier;Jeroen De Buck;Herman W. Barkema

  (2020)
  44 Citations

• Microbial symbiosis and coevolution of an entire clade of ancient vertebrates: the gut microbiota of sea turtles and its relationship to their phylogenetic history

  Titus Franciscus Scheelings;Robert J. Moore;Thi Thu Hao Van;Marcel Klaassen

  (2020)
  41 Citations

• Late weaning is associated with increased microbial diversity and Faecalibacterium prausnitzii abundance in the fecal microbiota of piglets.

  Francesca Romana Massacci;Francesca Romana Massacci;Mustapha Berri;Gaetan Lemonnier;Elodie Guettier

  (2020)
  39 Citations